Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0111
         (664 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g44760.1 68418.m05486 C2 domain-containing protein contains I...    29   2.1  
At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein ...    29   2.8  
At1g73240.1 68414.m08476 expressed protein                             28   4.8  
At1g28170.1 68414.m03458 sulfotransferase family protein similar...    28   4.8  
At4g24100.1 68417.m03460 protein kinase family protein contains ...    28   6.4  
At1g21160.1 68414.m02646 eukaryotic translation initiation facto...    28   6.4  
At1g10510.1 68414.m01183 leucine-rich repeat family protein simi...    27   8.4  

>At5g44760.1 68418.m05486 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 478

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 635 RLHLEAATRFLCLFLSSWIFPECPCRW 555
           R H E    F   F+ SWI+ +  C+W
Sbjct: 393 RAHFERIVSFFTTFIDSWIWFDSVCKW 419


>At3g22180.1 68416.m02799 zinc finger (DHHC type) family protein
           contains Pfam profile PF01529: DHHC zinc finger domain
          Length = 706

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +2

Query: 218 SLHPFSPRQIYKFEARIS*VGKIDH-SKRYGDNRYPYSGSACLISRSSTYGGTRNVRATF 394
           +++P  PR +  F+  ++  G +   S+ Y +       S  ++SRSST  G  +V+ + 
Sbjct: 66  AINPADPRIMSIFDTGVNGDGMVRGLSRNYDETGSQLQASPSVVSRSSTVAGNSSVKGSV 125

Query: 395 RRSARQAAPRRGS 433
             + R  +  R S
Sbjct: 126 EDAQRVESVSRRS 138


>At1g73240.1 68414.m08476 expressed protein
          Length = 519

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +2

Query: 278 GKIDHSKRYGDNRYPYSGSACLISRSSTYGGTRNVRATFRRSARQAAPRRGSDAARTS 451
           G +  SK  G+    Y+GS CLI    ++  T ++           AP +GS AA T+
Sbjct: 206 GLVSVSKFLGEQVLSYAGSFCLI---LSWEVTHHIHKVLHTKRFSFAPPKGSAAAETN 260


>At1g28170.1 68414.m03458 sulfotransferase family protein similar to
           steroid sulfotransferase 3 GI:3420008 from [Brassica
           napus]; contains Pfam profile PF00685: Sulfotransferase
           domain
          Length = 326

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 661 ALKYVPAYVVYIWKRLPDSSVSF 593
           ALK  P  +VY+W+ + D  VSF
Sbjct: 147 ALKNSPCKIVYVWRNVKDVLVSF 169


>At4g24100.1 68417.m03460 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 709

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +2

Query: 422 RRGSDAARTSSICRFGQAARAIPH--SHREGEPQTVPSAASTPPLS-PIDMDTQERSN 586
           RR S +   +S      +A    H     E EPQT P+    P  S P+++ T+  SN
Sbjct: 456 RRQSQSGPLTSRTVLSHSASEKSHIFERSESEPQTAPTVRRAPSFSGPLNLSTRASSN 513


>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
           family protein / eIF-2 family protein similar to
           SP|O60841 Translation initiation factor IF-2 {Homo
           sapiens}; contains Pfam profiles PF00009: Elongation
           factor Tu GTP binding domain, PF03144: Elongation factor
           Tu domain 2
          Length = 1088

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 156 RAAERILLVIEGGLHAVAGIPNHVFAPN 73
           +AA+ I +  +G  HA+AG   HV  PN
Sbjct: 786 KAAQGIKIAAQGLEHAIAGTALHVIGPN 813


>At1g10510.1 68414.m01183 leucine-rich repeat family protein similar
           to ribonuclease inhibitor (GI:164639) [Sus scrofa
           (pig)]; contains Pfam PF00560: Leucine Rich Repeat
           domains
          Length = 605

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 456 ILDVRAASLPRRGAACLALRRKVARTFLVPP*VLLREIR 340
           +LD+RA  L   GA+CLA   KV    L    +   EIR
Sbjct: 511 VLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIR 549


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,867,769
Number of Sequences: 28952
Number of extensions: 347582
Number of successful extensions: 1071
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)