Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0109
(690 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 94 1e-19
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 87 2e-17
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 83 2e-16
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 57 1e-08
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 55 5e-08
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 55 5e-08
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 54 1e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 5e-06
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 47 2e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 9e-05
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 6e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 42 6e-04
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 41 0.001
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 40 0.001
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 40 0.003
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 39 0.004
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 30 2.0
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.0
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 2.7
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 29 2.7
SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031) 29 4.7
SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031) 29 4.7
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 28 6.2
SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) 28 8.2
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 28 8.2
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 123 bits (297), Expect = 1e-28
Identities = 57/139 (41%), Positives = 83/139 (59%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIAL 619
+ Y +PT IQ Q PIA+SG++++ K K A++ PA+VHI +QP ++ GDGPI L
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVL 594
Query: 620 VLAPTRELAQQISASCCRF 676
+ APTREL QQI RF
Sbjct: 595 ICAPTRELCQQIYTEARRF 613
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 93.9 bits (223), Expect = 1e-19
Identities = 53/116 (45%), Positives = 68/116 (58%)
Frame = +2
Query: 308 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 487
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 488 AMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+
Sbjct: 113 --------------------FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQV 148
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 86.6 bits (205), Expect = 2e-17
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 512 A*PKRVPAKRWAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQISASCCRF 676
+ K A+ +P +V I P I R + GP AL+LAPTRELAQQI +F
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKF 201
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 83.0 bits (196), Expect = 2e-16
Identities = 42/130 (32%), Positives = 68/130 (52%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 446 YKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIALVL 625
++ PTPIQ Q MSG++++ + K AY LP + + + P GD P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 626 APTRELAQQI 655
PTREL QQ+
Sbjct: 152 TPTRELMQQV 161
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 70.9 bits (166), Expect = 9e-13
Identities = 39/110 (35%), Positives = 56/110 (50%)
Frame = +2
Query: 356 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPA 535
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A +
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 536 KRWAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQISASCCRFWTH 685
K AY+LP + + Q P+AL +APTRELA+QI +F H
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH 578
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 64.1 bits (149), Expect = 1e-10
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKR 526
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A +
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 527 VPAKRWAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQISASCCRF 676
K A++LP + + N P A+ +APTRELA QI +F
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKF 811
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
QPF K+FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
Y++PTPIQAQ P+ MSG++++A
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIA 147
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 536 KRWAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQISASCCRF 676
K+ +Y P + P I G IA+V+ PTRELA QI C +F
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKF 167
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
FE+ + G+ G+ +P+PIQ + P+A++G+++LA K K AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQISASCCRFWTHI 688
+ + ALVL PTRELA Q S C H+
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELGKHM 142
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/99 (32%), Positives = 51/99 (51%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
FE+ + G+ G+ +P+PIQ + P+A++G+++LA K K AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQISASCCRFWTHI 688
+ + ALVL PTRELA Q S C H+
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELGKHM 142
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPA 562
++ F + G+ G+ PT IQ QG P+A+SG+++L K K A+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 563 IVHINNQPPIRRGDGPIALVLAPTRELAQQ 652
I + Q DG ALV++PTRELA Q
Sbjct: 109 IETLWRQKWTSM-DGLGALVISPTRELAYQ 137
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 487
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 488 AMSG 499
G
Sbjct: 197 MAHG 200
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 548 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQISASCC 670
Y P + + P + G G A+V++PTRELAQQI C
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQIYREFC 226
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGD 604
+ V +G+ PTPIQA P+A+ GK++ A K A++LP + + +P +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSP 80
Query: 605 GPIALVLAPTRELAQQ 652
LV+ PTRELA Q
Sbjct: 81 AIRVLVITPTRELAIQ 96
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGD 604
QG+K MG+ T IQ + + G++LL K K A+++P +V + + + +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRN 643
Query: 605 GPIALVLAPTRELAQQ 652
G ++++PTREL+ Q
Sbjct: 644 GTGVIIISPTRELSLQ 659
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPP 589
P V++ +K MG +P PIQ + P S K+LL + K ++LP++ Q P
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP 222
Query: 590 IRRGDGPIALVLAPTRELAQQI 655
RG G I ++ PTRELA Q+
Sbjct: 223 -GRGYGTI--IVVPTRELASQM 241
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIAL 619
MG K+PT IQ P + G++ + K K A+ LP + + + P G A+
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPY-----GIFAV 79
Query: 620 VLAPTRELAQQIS 658
VL PTRELA QI+
Sbjct: 80 VLTPTRELAFQIA 92
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPA 562
I FE+ + + + V GYK+PTP+Q PI ++L+A + K A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 563 IVHINNQPP 589
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +2
Query: 344 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--NL 508
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N+
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 509 LA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 652
+A + K A++L + ++ P P + L+PT ELA+Q
Sbjct: 146 IAQSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQ 188
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/87 (26%), Positives = 43/87 (49%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGD 604
+G+ G+++P+PIQ + P+ G +L+A K K + + A+ ++ I +
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV-----ITESN 80
Query: 605 GPIALVLAPTRELAQQISASCCRFWTH 685
++L PTRE+A Q+ C H
Sbjct: 81 CIQIIILTPTREIAVQVKDVICAIGCH 107
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKR 526
EV + G P + F +Y + +G PT +Q WP + G+++
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 527 VPAKRWAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQISASC 667
KR AY+LP I I + +GP+ L+L + ++ C
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVC 283
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 461 PIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINN-QPPIRRGDGPIALVLAPTR 637
PIQA + G++++ + K ++ LP + + + + +RG P LV+APTR
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTR 157
Query: 638 ELAQQI 655
ELA+Q+
Sbjct: 158 ELAKQV 163
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = +2
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPI 613
+T G+++P+ IQ + + G++++A + K + + + I+ Q +R P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQ 67
Query: 614 ALVLAPTRELAQQI 655
ALVL+PTRELA QI
Sbjct: 68 ALVLSPTRELANQI 81
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 482 PIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 652
P+ M GK+++A + K A+++P + G AL+L+PTRELA Q
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQ 366
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 368 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 481
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 491 MSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQI 655
+S ++++A + K + + + I+ + G D ALVLAPTRELAQQI
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQI 175
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 7/130 (5%)
Frame = +2
Query: 287 PHPTVLK-RSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
P TV K +E N T S + + F D V + + + +PT
Sbjct: 343 PEATVSKGEKEVTIEAVGQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPT 402
Query: 461 PIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRG-----DGPIALVL 625
IQ P + +++ + K AY+ P +VH + R G P A ++
Sbjct: 403 VIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIV 461
Query: 626 APTRELAQQI 655
P RELA QI
Sbjct: 462 VPARELATQI 471
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 278 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 418
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -1
Query: 171 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 58
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 614 ALVLAPTRELAQQISASC 667
AL+L PTRELA QIS C
Sbjct: 35 ALILTPTRELAFQISEQC 52
>SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 127
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 478 LADSYVWKEFIGVAKTGSGKTLGLHLASHCAHKQ 579
L Y+ K+ + V TG GK+L HL HKQ
Sbjct: 10 LESLYLNKDVLAVLPTGYGKSLVFHLLPALLHKQ 43
>SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 233
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 478 LADSYVWKEFIGVAKTGSGKTLGLHLASHCAHKQ 579
L Y+ K+ + V TG GK+L HL HKQ
Sbjct: 116 LESLYLNKDVLAVLPTGYGKSLVFHLLPALLHKQ 149
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 608 PIALVLAPTRELAQQI 655
P ALVL+PTRELA QI
Sbjct: 4 PQALVLSPTRELANQI 19
>SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1022
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 521 KRVPAKRWAYILPAIVH 571
K +PAKRW +LP ++H
Sbjct: 722 KNLPAKRWQEVLPDVLH 738
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 521 KRVPAKRWAYILPAIVH 571
K +PAKRW +LP ++H
Sbjct: 998 KNLPAKRWQEVLPDVLH 1014
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,067,366
Number of Sequences: 59808
Number of extensions: 455742
Number of successful extensions: 1245
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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