Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0109
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 111 6e-25
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 109 1e-24
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 97 1e-20
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 96 2e-20
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 71 8e-13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 70 1e-12
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 70 1e-12
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 70 1e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 68 7e-12
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 61 8e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 56 2e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 56 2e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 56 2e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 56 3e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 56 3e-08
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 54 1e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 53 2e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 51 7e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 51 7e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 51 7e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 44 1e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 44 1e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 5e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 40 0.002
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 38 0.005
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 37 0.012
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 37 0.012
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 35 0.048
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 35 0.048
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 34 0.083
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 34 0.11
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 31 0.59
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.8
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 29 2.4
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 29 2.4
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 29 2.4
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 29 2.4
AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical ... 29 3.1
AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical ... 29 3.1
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.1
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.1
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81109-6|CAB03253.2| 179|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical pr... 27 9.6
U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium transp... 27 9.6
AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein. 27 9.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 111 bits (266), Expect = 6e-25
Identities = 54/134 (40%), Positives = 85/134 (63%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELL 145
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPI 613
+++PT IQ+ WPIAMSG+++++ K K A++LPA+VHI Q +RG+GP
Sbjct: 146 YGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPA 204
Query: 614 ALVLAPTRELAQQI 655
LVL PTRELAQQ+
Sbjct: 205 VLVLLPTRELAQQV 218
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 109 bits (263), Expect = 1e-24
Identities = 51/139 (36%), Positives = 82/139 (58%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIAL 619
Y++PTPIQA P A+SG+++L K K AY+ PAIVHI +QP ++ G+GP+A+
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAV 342
Query: 620 VLAPTRELAQQISASCCRF 676
++ PTRELA Q+ +F
Sbjct: 343 IVVPTRELAIQVFQEAKKF 361
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 442
F KNFY + + + EV+ YR + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 443 GYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDGPIALV 622
Y +PT IQAQ P MSG++++ K K A++LP HI +QP + GDGPIA++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 623 LAPTRELAQQISASCCRF 676
LAPTRELA Q +F
Sbjct: 383 LAPTRELAMQTYKEANKF 400
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 95.9 bits (228), Expect = 2e-20
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 512 A*PKRVPAKRWAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQISASCCRF 676
+ K A++LP +V I + P + R + GP A+++APTRELAQQI +F
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKF 401
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 70.9 bits (166), Expect = 8e-13
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 406
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 407 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQ 583
+ G ++ G+++P+PIQ+Q WP+ +SG++ + + K A++LPA++HI+ Q
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Query: 584 -PPIRRGD-----GPIALVLAPTRELAQQISASCCRF 676
+ D P LVL+PTRELAQQI ++
Sbjct: 150 LAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY 186
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*P 520
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 521 KRVPAKRWAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQISASCC 670
+ K A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 671 RF 676
+F
Sbjct: 244 KF 245
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*P 520
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 521 KRVPAKRWAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQISASCC 670
+ K A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 671 RF 676
+F
Sbjct: 228 KF 229
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*P 520
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 521 KRVPAKRWAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQISASCC 670
+ K A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 671 RF 676
+F
Sbjct: 225 KF 226
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 67.7 bits (158), Expect = 7e-12
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 463
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 464 IQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQP---PIRRGDGPIALVLAPT 634
IQ QG P+A+SG++++ K ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 635 RELAQQI 655
RELA+QI
Sbjct: 276 RELARQI 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRV 529
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++ +
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 530 PAKRWAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQI 655
K A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++A + K A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 655
+ + + + G+G P ++L PTRELA QI
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++A + K A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 655
+ + + + G+G P ++L PTRELA QI
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILP 559
P + F EAN + +Q+ V GY + TPIQ P+ G +++A + K A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 560 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 655
+ + + + G+G P ++L PTRELA QI
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILP 559
P + F +++ P +++ V+ GY TPIQ P+ GK++LA + K A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 560 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 655
+ + + + G +G P ++L PTRELA QI
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILP 559
P + F +++ P +++ V+ GY TPIQ P+ GK++LA + K A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 560 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 655
+ + + + G +G P ++L PTRELA QI
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/87 (36%), Positives = 48/87 (55%)
Frame = +2
Query: 428 GVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGDG 607
G+ G+++P+PIQ +A++G+++LA K K AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 608 PIALVLAPTRELAQQISASCCRFWTHI 688
A+V+ PTRELA Q S C HI
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHI 138
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
FE+ N + + GY +PTPIQ P+A++GK++ A K A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQI 655
+ +P + LVL PTRELA Q+
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQV 235
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++A + K A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 INNQPPIR-RGDG---PIALVLAPTRELAQQI 655
+ ++ + G+G P ++L PTREL QI
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++A + K A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 INNQPPIR-RGDG---PIALVLAPTRELAQQI 655
+ ++ + G+G P ++L PTREL QI
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
F EAN + +++ V GY + TPIQ P+ G +++A + K A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 572 INNQPPIR-RGDG---PIALVLAPTRELAQQI 655
+ ++ + G+G P ++L PTREL QI
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/93 (29%), Positives = 48/93 (51%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYI 553
H +++ V + ++ G+ +PTPIQ + P M GK+++A + K A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 554 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 652
+P + + R G AL+++PTRELA Q
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/93 (29%), Positives = 48/93 (51%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYI 553
H +++ V + ++ G+ +PTPIQ + P M GK+++A + K A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 554 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 652
+P + + R G AL+++PTRELA Q
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
F + ++ Q ++TM K TP+QA P + G ++L + K A+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQIS 658
++ P G AL+L PTRELA QI+
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIA 174
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
F + ++ Q ++TM K TP+QA P + G ++L + K A+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQIS 658
++ P G AL+L PTRELA QI+
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIA 174
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHI-----NNQ 583
+ + +K + Y IQ P + G ++L + K A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 584 PPIRRGDGPIALVLAPTRELAQQI 655
R+ DGP+AL+LAPTRELA QI
Sbjct: 452 NKARQDDGPLALILAPTRELAAQI 475
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/91 (27%), Positives = 51/91 (56%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPA 562
++ F++ + + +G+ G+++P+ IQ + +GK+++A + K + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 563 IVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ I+++ P + ALV+APTRELAQQI
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQI 113
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/91 (27%), Positives = 51/91 (56%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPA 562
++ F++ + + +G+ G+++P+ IQ + +GK+++A + K + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 563 IVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ I+++ P + ALV+APTRELAQQI
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQI 113
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Frame = +2
Query: 299 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 478
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 479 WPIAMSGKNLLA*PKRVPAKRWAYILPAI---VHINNQPPIRRGDGP--IALVLAPTREL 643
P +N+LA K A+ LP I + + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 644 AQQ 652
A Q
Sbjct: 217 AAQ 219
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/89 (22%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
F + + + + + +G+++ +Q +A+ KN++ + K A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 572 INNQPPIRRGD-GPIALVLAPTRELAQQI 655
+ + G GP A+++APT+EL QI
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQI 179
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/76 (31%), Positives = 45/76 (59%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGD 604
+ V+ +G+ T IQA+ + GK++LA K K A++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 605 GPIALVLAPTRELAQQ 652
G ++++PTREL+ Q
Sbjct: 140 GTGVIIVSPTRELSMQ 155
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLLA*PKRVPAKRWAYILPAIVHI---- 574
P+ V + ++ MG+ EPT IQ+ P A+ + ++L + K A+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 575 --NNQPPIRRGDGPIALVLAPTRELAQQI 655
+ + GP AL++APTREL QI
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQI 251
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/93 (25%), Positives = 49/93 (52%)
Frame = +2
Query: 377 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYIL 556
N I F++ + + +G+ G+++P+ IQ + P + ++++A + K + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ ++ Q +R AL+L+PTRELA QI
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQI 110
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
F E + + +G+ +P+ IQ P A+ GK+++ + K A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQI 655
+ + P LVL PTRELA QI
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQI 128
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/91 (25%), Positives = 48/91 (52%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPA 562
I F++ + + +G+ G+++P+ IQ + P + ++++A + K + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 563 IVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ ++ Q +R AL+L+PTRELA QI
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQI 110
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHI----- 574
P + +K M PTPIQ + M G +++A K A+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 575 NNQPPIRRGDGPIALVLAPTRELAQQ 652
++ P L++APTREL Q
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHI----- 574
P + +K M PTPIQ + M G +++A K A+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 575 NNQPPIRRGDGPIALVLAPTRELAQQ 652
++ P L++APTREL Q
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQ 829
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/88 (22%), Positives = 43/88 (48%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
FE + +K + P+P+QA+ P+ + G+++L K K + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQI 655
+++ R +++ PTRE++ QI
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQI 106
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/88 (22%), Positives = 43/88 (48%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVH 571
FE + +K + P+P+QA+ P+ + G+++L K K + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 572 INNQPPIRRGDGPIALVLAPTRELAQQI 655
+++ R +++ PTRE++ QI
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQI 106
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 34.3 bits (75), Expect = 0.083
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLLA*PKRVPAKRWAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+A + K A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ I+ P + LAPT ELA+QI
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQI 295
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 34.3 bits (75), Expect = 0.083
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLLA*PKRVPAKRWAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+A + K A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ I+ P + LAPT ELA+QI
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQI 320
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 34.3 bits (75), Expect = 0.083
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLLA*PKRVPAKRWAYIL 556
I F E V + + TM ++ PT IQ P+ + NL+A + K A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 557 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 655
+ I+ P + LAPT ELA+QI
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQI 704
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWAYILPAIVHINNQPPIRRGD 604
+G+K Y +PT IQ +++G +++ K K A ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 605 GPIALVLAPTRELAQQ 652
G AL+++PTRELA Q
Sbjct: 148 GLGALIISPTRELALQ 163
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLGL 549
KDN + +A S + +G AKTGSGKTL L
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLAL 130
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 31.5 bits (68), Expect = 0.59
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = +2
Query: 446 YKEPTPIQAQGWPIAMSGK-NLLA*PKRVPAKRWAYILPAIVHI------NNQPPIRRGD 604
+ EPT IQ+ P A+ + ++L + K A+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 605 GPIALVLAPTRELAQQI 655
GP AL++APTREL QI
Sbjct: 68 GPRALIVAPTRELVIQI 84
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 8 PASERIHSLNKHLQLNPKNNHVW 76
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = -2
Query: 266 KVGANRIPIWATHVLTSRQFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 87
++G ++ H + Q P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 86 IPVTRHDYFSDLVEDVYLNYGFFLTQ 9
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = -2
Query: 266 KVGANRIPIWATHVLTSRQFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 87
++G ++ H + Q P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 86 IPVTRHDYFSDLVEDVYLNYGFFLTQ 9
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = -2
Query: 266 KVGANRIPIWATHVLTSRQFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 87
++G ++ H + Q P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 86 IPVTRHDYFSDLVEDVYLNYGFFLTQ 9
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = -2
Query: 266 KVGANRIPIWATHVLTSRQFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 87
++G ++ H + Q P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 86 IPVTRHDYFSDLVEDVYLNYGFFLTQ 9
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical
protein Y56A3A.5 protein.
Length = 762
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 245 GFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNN 343
GFCS+ P N+ + LK YEV+E++ N
Sbjct: 478 GFCSVSPSNQRAVEETIGKLKELGYEVKEFKVN 510
>AL032655-6|CAA21722.1| 462|Caenorhabditis elegans Hypothetical
protein Y6B3B.11 protein.
Length = 462
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 575 LCAQWLARCRPN-VLPEPVLATPINSFQT*LSASLELEWA 459
L W+A C+PN V + L++ N Q + A L L W+
Sbjct: 266 LTGMWIATCKPNGVEAQTQLSSVANCIQGLVKAELALRWS 305
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 149 RRIIAEFVASSKFGTTVSTAIIPV 78
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 149 RRIIAEFVASSKFGTTVSTAIIPV 78
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 584 VGCLCAQWLARCRPNVLPEPVLATPINSFQT*LSASLELEWASVLC 447
VG +C + L +C P V TPINS + + + ASV C
Sbjct: 363 VGEICTETLVQCFVEPCPPLVSCTPINSTVINSTTTSDSGCASVSC 408
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 584 VGCLCAQWLARCRPNVLPEPVLATPINSFQT*LSASLELEWASVLC 447
VG +C + L +C P V TPINS + + + ASV C
Sbjct: 428 VGEICTETLVQCFVEPCPPLVSCTPINSTVINSTTTSDSGCASVSC 473
>Z81109-6|CAB03253.2| 179|Caenorhabditis elegans Hypothetical
protein R10D12.12 protein.
Length = 179
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 617 KQSDHHLSE*AVGCLCAQWLARCRPNVLPEPVL 519
K D+H +E AV +L +C P+ LPE +L
Sbjct: 116 KLMDNHQAELAVQLSDEGYLLQCTPSTLPETIL 148
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical
protein F57B7.4 protein.
Length = 509
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 291 CGS*KFLLKGWSEQNPNLGDACSDLQTILFSHQILQILQIYCHRCQIEKNYRRICC 124
CG + L+G QN C D+ + S L+ YC K++R ICC
Sbjct: 448 CGYNMWCLEGSCVQNTKKWMDCKDINSKTCSKYSTSKLKHYCK----SKDFREICC 499
>U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium
transporter homolog protein1 protein.
Length = 534
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 212 QFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRH 69
+FFF S ++ +I + A + R EF+ + T +ST I PV H
Sbjct: 114 RFFFQYVFSATAATIVSGAVAER--CEFITYVTYCTVISTFIYPVLTH 159
>AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein.
Length = 509
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 291 CGS*KFLLKGWSEQNPNLGDACSDLQTILFSHQILQILQIYCHRCQIEKNYRRICC 124
CG + L+G QN C D+ + S L+ YC K++R ICC
Sbjct: 448 CGYNMWCLEGSCVQNTKKWMDCKDINSKTCSKYSTSKLKHYCK----SKDFREICC 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,680,330
Number of Sequences: 27780
Number of extensions: 345021
Number of successful extensions: 1168
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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