Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0107
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.0  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 299 WLVVDTDLETGWTPVTNWIV 240
           WL+V+ D  T W    +W+V
Sbjct: 304 WLLVNFDCSTMWLKDPSWLV 323


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 11   PVSTSHWSRTRQSSLPRRPT 70
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/61 (19%), Positives = 23/61 (37%)
 Frame = +2

Query: 11  PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 190
           P  TS     R         + +   PR +   +       N   ++ +TW+++ C  VT
Sbjct: 260 PAETSMNDANRNDCAKPLTQIRNIRGPRKRLRFAYVTRTGANIKKLIVNTWISLFCVKVT 319

Query: 191 S 193
           +
Sbjct: 320 N 320


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 161 WLAVCCTVVTSYPRM 205
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 126 LVGGLEACVCDLG 88
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 181 GTAYSKPCTCHDGGRISPSG 122
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,680
Number of Sequences: 336
Number of extensions: 3629
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)