Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0105
         (705 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q95QT7 Cluster: Glutamate-gated chloride channel protei...    34   3.0  
UniRef50_Q4Y2Z9 Cluster: Putative uncharacterized protein; n=3; ...    34   3.0  
UniRef50_Q7QTY5 Cluster: GLP_169_22321_32229; n=1; Giardia lambl...    34   3.9  
UniRef50_O96122 Cluster: Putative uncharacterized protein PFB008...    34   3.9  
UniRef50_UPI00006CF333 Cluster: hypothetical protein TTHERM_0006...    33   5.2  
UniRef50_Q98QJ2 Cluster: N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETY...    33   5.2  

>UniRef50_Q95QT7 Cluster: Glutamate-gated chloride channel protein
           4; n=2; Caenorhabditis|Rep: Glutamate-gated chloride
           channel protein 4 - Caenorhabditis elegans
          Length = 500

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 60  KSIVNIRTSVHRSTRMHRTSYPLDHDDFKLVMAAYNY 170
           K I + R ++H +  MH + YP+DH + ++  A+Y Y
Sbjct: 169 KLIYDRRLTLHLACSMHLSRYPMDHQNCEIAFASYAY 205


>UniRef50_Q4Y2Z9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1306

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = -1

Query: 615 FTIFLHIYRSVS------LVLKNLFQIQILYGIRYQTLKSNTIIKFILNVLVSLMYF 463
           F  FLHIY   +      LV+ N+F+I IL+ I +       I+K+IL  +V + YF
Sbjct: 158 FYNFLHIYSIYNQKAFYKLVIDNIFEIDILFLILFSIKNCCKIVKYILFKIVIITYF 214


>UniRef50_Q7QTY5 Cluster: GLP_169_22321_32229; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_169_22321_32229 - Giardia lamblia
            ATCC 50803
          Length = 3302

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -1

Query: 681  YRSVKILLKLYLDHIS*TCTIYFTIFLHIYRSVSLVLKNLFQIQI 547
            Y  + + +KLYL HI  T TI F +   +Y  VS  L+++  + +
Sbjct: 1591 YVKLLLFMKLYLSHILSTLTIVFAVLFQLYIPVSHELEHIIDLSL 1635


>UniRef50_O96122 Cluster: Putative uncharacterized protein PFB0085c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0085c - Plasmodium falciparum
           (isolate 3D7)
          Length = 900

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -3

Query: 673 CKNLIKIISRSY*LDMHNLFYNFSTYLQKCFTRFEKFIPNTNFVWNTLSNTKIKY-NHKV 497
           CK LI+I  +   L ++++FY +      C   F++ I      W  LSN KI+Y  +K+
Sbjct: 205 CKKLIEIGEKYLELKLNSVFYEWYDKKVICVEDFKRKIERCRIAWKALSN-KIQYLCNKI 263

Query: 496 YT*CL 482
              CL
Sbjct: 264 IINCL 268


>UniRef50_UPI00006CF333 Cluster: hypothetical protein TTHERM_00069220;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00069220 - Tetrahymena thermophila SB210
          Length = 1066

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = -3

Query: 652  ISRSY*LDMHNL--FYNFSTYLQKCFTRFEKFIPNTNFVWNTLSNTKIKYNHKVYT*CLS 479
            IS SY LD + L  +  F   L K      KF+PN   +++ L NT  +  +K+ +   +
Sbjct: 864  ISGSYELDENKLITWEEFIECLNKKQNLKRKFLPNNYLLYHCLKNTNKEKEYKINSDNAN 923

Query: 478  VFDVFYYLV 452
             FDVF  L+
Sbjct: 924  DFDVFRKLI 932


>UniRef50_Q98QJ2 Cluster: N-ACETYLGLUCOSAMINE-6-PHOSPHATE
           DEACETYLASE; n=1; Mycoplasma pulmonis|Rep:
           N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE - Mycoplasma
           pulmonis
          Length = 253

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +2

Query: 344 DHLISLSYGSKYLECVFYKMIKNLISKAMTRPSKH*YQIIKYIKDTKTLSINFMIVFDFS 523
           D  I +    KYLE  F+K  KNL +  +  P ++ Y++IK        SI     FDFS
Sbjct: 15  DENIIIPLNEKYLE--FFKKQKNLKTTIVVAPEENDYKLIKKYSSDFHFSIGHSNCFDFS 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,759,918
Number of Sequences: 1657284
Number of extensions: 12173928
Number of successful extensions: 27596
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27589
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)