Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0105
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    30   0.016
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    30   0.016
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.79 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.4  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 684 TYRSVKILLKLYLDHIS*TCTIYFTIFLHIYRSVSLVLKNLFQI 553
           T  SV +L+K+    +   C++YF IF +IY    +V +N   I
Sbjct: 236 TIFSVPLLMKIASQFVGIFCSLYFCIFGYIYDDEMVVPQNFHDI 279


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 684 TYRSVKILLKLYLDHIS*TCTIYFTIFLHIYRSVSLVLKNLFQI 553
           T  SV +L+K+    +   C++YF IF +IY    +V +N   I
Sbjct: 61  TIFSVPLLMKIASQFVGIFCSLYFCIFGYIYDDEMVVPQNFHDI 104


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 627 CTIYFTIFLHIYRSVSLVLKNLFQIQIL 544
           C +   I  H+Y  V+LV+KNL +  IL
Sbjct: 153 CYLEIKIDEHLYPVVALVVKNLIKPTIL 180


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -1

Query: 621 IYFTIFLHIYRSVSLVLKNLFQIQILYGIRYQTLKSNTIIKFILNVLVSLMYFIIWY*CF 442
           +Y T+F  +Y  VSL+L          G R   LK+N    FI+   +S+   +++Y   
Sbjct: 286 VYNTLFFIVY--VSLLLGPHPTYFGKTG-RKTVLKTNKYCNFIILFYLSVFVILVYYASL 342

Query: 441 D 439
           D
Sbjct: 343 D 343


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 KNLISKAMTRPSKH*YQIIKYIKDTKT 487
           +NL+  +  RP    YQ + YI +T++
Sbjct: 63  ENLVVTSSNRPWWERYQPVSYILNTRS 89


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 KNLISKAMTRPSKH*YQIIKYIKDTKT 487
           +NL+  +  RP    YQ + YI +T++
Sbjct: 64  ENLVVTSSNRPWWERYQPVSYILNTRS 90


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 KNLISKAMTRPSKH*YQIIKYIKDTKT 487
           +NL+  +  RP    YQ + YI +T++
Sbjct: 64  ENLVVTSSNRPWWERYQPVSYILNTRS 90


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -1

Query: 627 CTIYFTIFLHIYRSVSLVLKNLFQ 556
           C++Y+ + + +  + +L LKN F+
Sbjct: 168 CSLYYILQITLIVNYALALKNRFK 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,501
Number of Sequences: 336
Number of extensions: 3587
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)