BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0105 (705 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0268 - 1941515-1941534,1941868-1942057,1942155-1942322,194... 28 8.3 02_02_0707 + 13144147-13144788,13145115-13148663 28 8.3 >12_01_0268 - 1941515-1941534,1941868-1942057,1942155-1942322, 1943425-1943568,1944284-1944443,1944512-1944621, 1944900-1945019,1945649-1945766,1946610-1946729, 1947228-1947285,1947590-1947723,1949332-1949414, 1949544-1949786,1949851-1949976,1950075-1951562 Length = 1093 Score = 27.9 bits (59), Expect = 8.3 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = -1 Query: 675 SVKILLKLYLDHIS*TCTI---YFTIFLHIYRSVSLVLKNLFQIQILYGIRYQTLKSNTI 505 SV+++ LYL+HI TC I + TI ++ VL N+ ++ I G+ + Sbjct: 466 SVRVINSLYLEHI--TCNISNQWITINGSNIQTDDKVLLNVRKLYI--GLSMSKRRQREQ 521 Query: 504 IKFILNVLVSLMYFIIW 454 + ILN L L IW Sbjct: 522 LSNILNCLTHLEDLTIW 538 >02_02_0707 + 13144147-13144788,13145115-13148663 Length = 1396 Score = 27.9 bits (59), Expect = 8.3 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Frame = -1 Query: 639 IS*TCTIYFTIFLHIYRSVSLVLKNLFQIQIL------YGIRYQ 526 +S C+I FT+F H+ + + L L+ F I+ YG YQ Sbjct: 347 LSTVCSIVFTLFYHLRQELKLQLEAFFSCVIIRLGQSRYGASYQ 390 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,215,263 Number of Sequences: 37544 Number of extensions: 295715 Number of successful extensions: 591 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 576 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 591 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1815633512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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