Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0104
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 35 6e-04
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 35 6e-04
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 35 8e-04
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 31 0.007
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 31 0.007
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 30 0.017
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 29 0.052
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 28 0.069
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 22 4.6
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 22 6.0
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 35.1 bits (77), Expect = 6e-04
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C +C+++ S ++ HM TH+G R + CR C
Sbjct: 52 CPVCDRRFSQSSSVTTHMRTHSGERPYRCRLC 83
Score = 30.7 bits (66), Expect = 0.013
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C CNK S NL H+ TH+G + C C
Sbjct: 24 CIDCNKSFSQAANLTAHVRTHSGEKPFRCPVC 55
Score = 28.7 bits (61), Expect = 0.052
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C +C K S+ L H+ H+G + + C+ C
Sbjct: 80 CRLCKKAFSDSSTLTKHLRIHSGEKPYECKLC 111
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 35.1 bits (77), Expect = 6e-04
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C +C+++ S ++ HM TH+G R + CR C
Sbjct: 308 CPVCDRRFSQSSSVTTHMRTHSGERPYRCRLC 339
Score = 31.9 bits (69), Expect = 0.006
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 649 SVCGICNKKLSNQYNLRVHMETHAGRR-HACRACS 750
+VC IC K + L+ H+ TH+G + + C C+
Sbjct: 250 NVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCN 284
Score = 30.7 bits (66), Expect = 0.013
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C CNK S NL H+ TH+G + C C
Sbjct: 280 CIDCNKSFSQAANLTAHVRTHSGEKPFRCPVC 311
Score = 28.7 bits (61), Expect = 0.052
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C +C K S+ L H+ H+G + + C+ C
Sbjct: 336 CRLCKKAFSDSSTLTKHLRIHSGEKPYECKLC 367
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 34.7 bits (76), Expect = 8e-04
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 652 VCGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
+C CN++ + YNL +H TH R ++C C
Sbjct: 81 ICKYCNRQFTKSYNLLIHERTHTDERPYSCDIC 113
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 31.5 bits (68), Expect = 0.007
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C C+K+ + ++L+ HM H G R + C C
Sbjct: 12 CQECHKRFTRDHHLKTHMRLHTGERPYRCEHC 43
Score = 29.5 bits (63), Expect = 0.030
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRACS 750
C C+++ NLR H+ H G R + C CS
Sbjct: 40 CEHCDRQFVQVANLRRHLRVHTGERPYGCEHCS 72
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 31.5 bits (68), Expect = 0.007
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C C+K+ + ++L+ HM H G R + C C
Sbjct: 165 CQECHKRFTRDHHLKTHMRLHTGERPYRCEHC 196
Score = 29.5 bits (63), Expect = 0.030
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRACS 750
C C+++ NLR H+ H G R + C CS
Sbjct: 193 CEHCDRQFVQVANLRRHLRVHTGERPYGCEHCS 225
Score = 28.3 bits (60), Expect = 0.069
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 607 PETTDYEKKWRLTSSVCGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
PE D + T C +CN+ ++ L+ H TH G + C+ C
Sbjct: 124 PEVKDSSRDRPFT---CEVCNRSFGYKHVLQNHERTHTGEKPFECQEC 168
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 30.3 bits (65), Expect = 0.017
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRAC 747
C IC++ LS + L++H TH G R C+ C
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTGERPFKCKIC 168
Score = 27.1 bits (57), Expect = 0.16
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAG 723
C +C+KK +N L+ H+ H G
Sbjct: 197 CPVCHKKFTNALVLQQHIRLHTG 219
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGR-----RHACRAC 747
C IC + + + NL+ HM H + H C C
Sbjct: 165 CKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVC 200
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 28.7 bits (61), Expect = 0.052
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRR-HACRACS 750
C IC K S + L+ H+ TH G + +C C+
Sbjct: 10 CTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCN 42
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 28.3 bits (60), Expect = 0.069
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 664 CNKKLSNQYNLRVHMETHAG-RRHACRACS 750
C K+ + L+ H+ TH G +R AC C+
Sbjct: 352 CGKRFTRSDELQRHLRTHTGEKRFACPICN 381
Score = 27.9 bits (59), Expect = 0.092
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETH--AGRRHACRACS 750
C ICNK+ +L H++TH G++ + +CS
Sbjct: 377 CPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCS 410
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 336 DADTNSTLTPTEPEPHENSSPINLEAKNE 422
D D ST+ P PE ++S+ KN+
Sbjct: 206 DCDVPSTIPPPPPEEDDDSNIPQNNPKNK 234
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -3
Query: 235 ASV-PLPRILGPPRECYHLP 179
ASV PLPR PP + H P
Sbjct: 26 ASVQPLPRHFNPPSDKLHHP 45
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,395
Number of Sequences: 336
Number of extensions: 3617
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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