Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0104
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 33 0.32
08_02_1121 + 24457413-24457528,24458395-24458552,24458927-244590... 30 1.7
03_06_0607 + 35037467-35038624 30 1.7
12_01_0454 + 3580332-3581714 30 2.3
11_06_0691 - 26315738-26315848,26315939-26316163,26316249-263166... 30 2.3
07_03_1400 + 26287124-26287298,26287925-26288007,26288141-262882... 30 2.3
04_03_0712 + 18959770-18959930,18961115-18961238 30 2.3
01_01_1126 + 8925685-8925745,8926178-8926343,8927135-8927585,892... 29 3.0
02_04_0316 - 21978330-21979397 29 3.9
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 29 5.2
10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096 28 6.9
08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114... 28 6.9
07_03_1004 + 23244479-23244648,23245104-23245276,23245535-232456... 28 6.9
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 28 6.9
02_01_0072 - 502785-504038 28 6.9
01_06_1298 - 36099408-36099686,36099760-36099927,36100036-361002... 28 6.9
10_08_0854 + 21086253-21086258,21086320-21086480,21087065-210871... 28 9.1
09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 28 9.1
05_05_0022 + 21592403-21593083,21593720-21594208 28 9.1
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 28 9.1
04_01_0450 - 5840015-5840055,5840635-5840977,5841326-5841537,584... 28 9.1
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGRRHACRACS 750
CG+CN K ++NLR H AGR+H + S
Sbjct: 193 CGVCNVKCMTRFNLREH---EAGRKHRDKVAS 221
>08_02_1121 +
24457413-24457528,24458395-24458552,24458927-24459042,
24459735-24460400
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 35 NNVIGALNRMLQTGALTDVTLSAS 106
N + +L RMLQ G LTD+T++A+
Sbjct: 170 NTALSSLARMLQEGILTDITINAT 193
>03_06_0607 + 35037467-35038624
Length = 385
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 610 ETTDYEKKWRLTSSV--CGICNKKLSNQYNLRVHMETH 717
E EK+ L V CG+C K NLR+HM H
Sbjct: 149 EVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGH 186
>12_01_0454 + 3580332-3581714
Length = 460
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETH 717
CGIC K NLR+HM H
Sbjct: 226 CGICGKGFKRDANLRMHMRGH 246
>11_06_0691 -
26315738-26315848,26315939-26316163,26316249-26316602,
26316681-26316795,26316882-26316925,26317026-26317122,
26317243-26317406,26317499-26317726,26317903-26318222,
26320028-26320136
Length = 588
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 29 IQNNVIGALNRMLQTGALTDVTLSASGPMLRRIESS 136
I+N G LN M++ G + D + P+ R+ ESS
Sbjct: 73 IENEACGNLNGMMKHGVIDDKEVEVRTPLFRQAESS 108
>07_03_1400 +
26287124-26287298,26287925-26288007,26288141-26288270,
26288369-26288442,26288797-26288883,26288976-26289100,
26289232-26289292,26289606-26289683,26289785-26289890,
26289978-26290123,26290264-26290380
Length = 393
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 293 IAPSRADAQGFWTNRRRYELNTNSNR 370
+AP RAD QG W R + NSN+
Sbjct: 276 VAPKRADPQGLWRGCRMNHASCNSNQ 301
>04_03_0712 + 18959770-18959930,18961115-18961238
Length = 94
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -3
Query: 307 ARRSNEGSTSRDAVTSPVT*TSGGASVPLPRILGPPR 197
A RSN S+S +SP GA P PR L PPR
Sbjct: 24 ANRSNNSSSSSGRTSSPAALLRWGAPEPAPR-LRPPR 59
>01_01_1126 +
8925685-8925745,8926178-8926343,8927135-8927585,
8927832-8927900,8928067-8928110,8928211-8928355
Length = 311
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 219 GSGTEAPPDVHVTGEVTASRLVLPSLLRLAQTLKVSGLTDADTNSTLTPTE 371
GSG P D +V L+ PS+ R +L +G TD D + +PTE
Sbjct: 181 GSGDTTPID-----QVAIIELLAPSIFRAIVSLHPAGSTDPDAVAFFSPTE 226
>02_04_0316 - 21978330-21979397
Length = 355
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 655 CGICNKKLSNQYNLRVHMETHAGR 726
C IC K NLR+HM H R
Sbjct: 146 CDICGKGFRRDANLRMHMRAHGDR 169
>12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 649 SVCGICNKKLSNQYNLRVHMETHAGRRHA 735
S C ICN NL +H+ET +HA
Sbjct: 1104 SWCRICNISCGTVENLNIHVETREHHQHA 1132
>10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096
Length = 404
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 121 AHRIVLASCSQYF-AQLFKELEGDNTLVVVL--GCEAAELKLLLTFM 252
AHR VLA+ S F A+L+ ++ N VVV EA KLLL F+
Sbjct: 210 AHRCVLAARSPVFGAELYGLMKEGNAAVVVRVEDMEARVFKLLLRFV 256
>08_02_1023 -
23710825-23710950,23711037-23711120,23711367-23711492,
23711593-23711712,23712046-23712153,23712243-23712395,
23712505-23712600,23712716-23712800,23713278-23714268,
23714870-23714915,23715806-23715964,23716516-23716651,
23716734-23716900,23717366-23717696,23717827-23718062,
23718326-23718514
Length = 1050
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 141 CQDDSMRLNIGPLALRVTSVRAPV 70
CQ S L IGP ALR +V +P+
Sbjct: 315 CQGGSAMLGIGPAALRPNTVSSPI 338
>07_03_1004 +
23244479-23244648,23245104-23245276,23245535-23245638,
23245849-23246037,23246508-23248076
Length = 734
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 548 RFDPVCSVYPFPSSAKALGDLLSLFRVFNRRVKRE*VLCRWCFVFRFQ 405
R VC V+P+P+ + SLFR+ RR +R+ L + + FQ
Sbjct: 115 RASGVCLVFPWPARRRCPSRRRSLFRLRCRRGRRQLHLANSDYYYFFQ 162
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 664 CNKKLSNQYNLRVHMETHA-GRRHAC 738
C K S +NLR H++THA H C
Sbjct: 153 CGKAFSLDFNLRSHLKTHALENYHVC 178
>02_01_0072 - 502785-504038
Length = 417
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 282 PAGMQSLLPLHERQEELQFRCLAS*DHHESVITFQLLKELREILATRCQDDSMR--LNIG 109
PA L LH Q + R LA+ HH +++ L +L + A DD+ R L IG
Sbjct: 33 PAQDDELQVLHALQAHVADR-LAALSHHPPLLSLAFLSKLLD--AVLSSDDAFREVLGIG 89
Query: 108 PLA 100
P+A
Sbjct: 90 PVA 92
>01_06_1298 -
36099408-36099686,36099760-36099927,36100036-36100203,
36100346-36100550,36100683-36100880,36101963-36102048,
36103730-36104143
Length = 505
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 GAGR**HSRGGPRMRGSGTEAPPDVHVTGEV-TASRLVLPSLLR 302
GAGR +GG G+G A V G V A+R+VL +LLR
Sbjct: 33 GAGRRSSGKGGSARAGAGAGAAGAVRGGGAVRRAARVVLAALLR 76
>10_08_0854 +
21086253-21086258,21086320-21086480,21087065-21087175,
21087275-21087329,21087796-21087963,21088232-21090082,
21090355-21090690
Length = 895
Score = 27.9 bits (59), Expect = 9.1
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Frame = +3
Query: 273 SRLVLPSLLRLAQTLKVSGLTDADTNSTLTPTEPEPHE------NSSPINLEAKNETPTT 434
S L++ R+ + +SG++ T +LTP + E SSP +L A + T
Sbjct: 469 SSLLVEGKGRVLRKSLLSGISR--TEQSLTPNCQQSKEAQVLTVTSSPTHLHAVLKLDPT 526
Query: 435 ENSFSFDTPIKDAKEGEEIAESFGRRWKGID*ANWIKSF 551
+SF F+ K +E + WK + NWI +F
Sbjct: 527 NDSFGFEFCTKGPEE-----SIYANIWKAGNELNWIYTF 560
>09_06_0274 +
21967740-21968230,21968411-21968550,21968711-21968905,
21969524-21969652,21970063-21970218,21970507-21970589,
21972229-21972433,21972601-21972805,21973059-21973194,
21973990-21974164,21974470-21974528,21974642-21974716,
21974804-21974920,21975010-21975080,21975170-21975473,
21975721-21976086,21976404-21976514
Length = 1005
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 323 FWTNRRRYELNTNSNRARAPRKFIAYQLGSEKRNTNDRELI 445
F+ N RRY + N + R P+K Q S + N R ++
Sbjct: 740 FYQNHRRYVKSLNDMQLRNPKKVADTQYCSPEATANGRPIV 780
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 652 VCGICNKKLSNQYNLRVHMETHAGRRH 732
VC +CNK + N+++HM H GR +
Sbjct: 212 VCHVCNKAFNRYNNMQMHMWGH-GREY 237
>04_04_1197 + 31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 634 IFFRNLLFLEHY*SKGCARVTTDSVQILNDLIQFAQSIPFHRLPKLSAISSP 479
+ F NL FL GC + T S++ L L+ +S+ + PKL + P
Sbjct: 1164 LLFHNLRFLTSLAIYGCRNLATISIESLRQLV-CLKSLELYGCPKLFSSDVP 1214
>04_01_0450 -
5840015-5840055,5840635-5840977,5841326-5841537,
5842381-5842477
Length = 230
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 198 RGGPRMRG-SGTEAPPDVHVTGEVTASRLVLPSLLRLAQTLKVSGLTDADTNS 353
+GGP RG +G++ PP+ + E T+S LR+A + ++S +++ +S
Sbjct: 108 KGGPTSRGGNGSDTPPECDRSPETTSSE----GKLRVAGSSELSSISEVKGSS 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,230,976
Number of Sequences: 37544
Number of extensions: 432656
Number of successful extensions: 1456
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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