Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0104
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 36 0.029
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 34 0.12
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 32 0.35
At3g57140.2 68416.m06362 patatin-related contains Patatin domain... 31 0.62
At3g57140.1 68416.m06361 patatin-related contains Patatin domain... 31 0.62
At2g45250.1 68415.m05633 expressed protein 31 0.82
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 31 0.82
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 30 1.4
At4g37440.1 68417.m05299 expressed protein 29 2.5
At1g61750.1 68414.m06964 expressed protein contains Pfam profile... 29 2.5
At1g18670.1 68414.m02330 protein kinase family protein contains ... 29 2.5
At3g53540.1 68416.m05912 expressed protein 29 3.3
At5g56790.1 68418.m07087 protein kinase family protein contains ... 29 4.4
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 29 4.4
At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative... 29 4.4
At3g46750.1 68416.m05075 hypothetical protein 28 5.8
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 28 5.8
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 7.6
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 AHRIVLASCSQYF-AQLFKELEGDNTLVVVLGCEAAELKLLLTFM 252
AH++VLA+ S +F ++ F E E +NT V + E K LL FM
Sbjct: 211 AHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFM 255
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 KAHRIVLASCSQYFAQLF-KELEGDNTLVVVLGCEAAELKLLLTFM 252
+AH++VLA+ SQ+F +F L +N+ VV+ E K LL FM
Sbjct: 217 QAHKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFM 262
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +1
Query: 121 AHRIVLASCSQYF-AQLFKELEGDNT-LVVVLGCEAAELKLLLTFM 252
AH++VLA+ S F AQLF L +NT +++ +A K+LL F+
Sbjct: 215 AHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIFKMLLHFI 260
>At3g57140.2 68416.m06362 patatin-related contains Patatin domain
PF01734
Length = 801
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 387 NSSPINLEAKNETPTTENSFSFDTPIKDAKEGEEIAESFG 506
NS P + + ++E P T S D+P KD +GE A G
Sbjct: 751 NSEPEDSQNESEIPETPESVQLDSPEKDIIDGESSASEDG 790
>At3g57140.1 68416.m06361 patatin-related contains Patatin domain
PF01734
Length = 801
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 387 NSSPINLEAKNETPTTENSFSFDTPIKDAKEGEEIAESFG 506
NS P + + ++E P T S D+P KD +GE A G
Sbjct: 751 NSEPEDSQNESEIPETPESVQLDSPEKDIIDGESSASEDG 790
>At2g45250.1 68415.m05633 expressed protein
Length = 204
Score = 31.1 bits (67), Expect = 0.82
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 225 GTEAPP-DVHVTGEVTASRLVLPSLLRLAQTLKVSGLTDADTNSTLTPTEPEPHENSSPI 401
G + PP D T + RLV T K + T TN PT+ P SSP
Sbjct: 54 GVKKPPVDSPATTNAASGRLVYVRRRVEVDTSKAAAST---TNPNPPPTKAPPQIPSSPA 110
Query: 402 NLEAKNETPTT 434
+A+ TPT+
Sbjct: 111 QAQAQEPTPTS 121
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 577 PERSLLTNNVPETTDYEKKWRLTSSVCGICNKKLSNQYNLRVHME 711
P R L N + D ++KW + C IC + L +H+E
Sbjct: 472 PNRLLAITNTCDDDDDKEKWSFSGFACAICLDSFVRRKLLEIHVE 516
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +3
Query: 342 DTNSTLTPTEPEPHENSSPINLEAKNETPTTENSFSFDTPIKDAKEGEEIAESFGRRWK 518
DT+++ TP + N+SP+ K + T+N+ + ++ KE ++ ++FG K
Sbjct: 599 DTDASFTPAKKTTESNASPL----KKISEVTDNTEDLNRSMQVLKENADMGDNFGSSQK 653
>At4g37440.1 68417.m05299 expressed protein
Length = 471
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 387 NSSPINLEAKNETPTTENSFSFDTPIKDAKEGEEIAE 497
N + NL+ KN++ E +FS +TP + +EG+ E
Sbjct: 245 NDNSRNLDKKNKSAKDETAFSEETPPLEFREGDAYLE 281
>At1g61750.1 68414.m06964 expressed protein contains Pfam profile:
PF01657 domain of unknown function
Length = 352
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 363 PTEPEPHENSSPINLEAKNETPTTENSFSFDTPI 464
P P P P L +N+TP+++ SFSF I
Sbjct: 250 PPPPPPPPPPPPQRLYGENDTPSSDESFSFKLAI 283
>At1g18670.1 68414.m02330 protein kinase family protein contains
Protein kinases ATP-binding region signature,
PROSITE:PS00107 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 662
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 303 LAQTLKVSGLTDADTNSTLTPTEPEPHENSS 395
L +TLK+ GL+DAD N T +PH+ +
Sbjct: 378 LRETLKLKGLSDADINLIETLLSIQPHKRGT 408
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 321 VSGLTDADTNSTLTPTEPEPHENSSPINLEAKNETPTTENSFSFDTPIKDAKEGEEIAES 500
+S T D N + P P+P E+S E +P + SFD D G E ES
Sbjct: 665 ISRRTTEDVNHSSVPDPPQPRESSK----EGDQPSPVSVLEASFD---DDVSSGSECFES 717
Query: 501 FGRRWKGI 524
+G+
Sbjct: 718 VSADLRGL 725
>At5g56790.1 68418.m07087 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 669
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 236 SFSSAASHPRTTTRVLSPSSSLKSCAKYWLHDARTILCALTLVR 105
S +S++SHP TT +LSPS L +R + L L R
Sbjct: 280 SMASSSSHPVTTADLLSPSGDLSKAHTETPRKSRFAVLRLALSR 323
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 664 CNKKLSNQYNLRVHMETHAGRR-HAC 738
C K S +NLR HM+TH+ H C
Sbjct: 145 CGKAFSLDFNLRSHMKTHSQENYHIC 170
>At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
Ferredoxin--NADP reductase, chloroplast precursor (EC
1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
{Mesembryanthemum crystallinum} SP|P41343, {Spinacia
oleracea} SP|P00455, [Capsicum annuum] GI:6899972
Length = 369
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 100 RQRTNVKAHRIVLAS-CSQYFAQLFKELEGDNTLVVVLGCEAAE 228
R++ N K ++ + + +QY A+L++ L+ DNT V + G + E
Sbjct: 290 REQANDKGEKMYIQTRMAQYAAELWELLKKDNTFVYMCGLKGME 333
>At3g46750.1 68416.m05075 hypothetical protein
Length = 415
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 318 KVSGLTDADTNSTLTPTEPEPHENSSPINLEAKNETPTTENSFSFDTPIKD 470
KVS T A T PEP E +N A+ T T F+T + D
Sbjct: 257 KVSDATQAITKKIQDMAFPEPTEREEEVNDVAEINTAGTNQPTGFNTKVWD 307
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 405 LEAKNETPTTENSFSFDTPIKDAKEGEEIAESFGRRWKGID*ANW 539
+E N+ TTEN+ S + P K+ +EI + F R+ A W
Sbjct: 941 VEPVNQDKTTENATSGEPPNSTEKKKDEIKDWFDCRYVSASEAVW 985
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 348 NSTLTPTEPEPHENSSPINLEAKNETPTTENSFS 449
+S ++P P S P N N TP T+NS S
Sbjct: 289 SSVVSPPSPPRKSVSGPDNPSPNNPTPVTDNSSS 322
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,798,386
Number of Sequences: 28952
Number of extensions: 324854
Number of successful extensions: 1230
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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