Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0102
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    25   0.57 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   0.99 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   0.99 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.3  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.3  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.2  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.2  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 252 FGC*CGTCELLHCIKPDSSAERHPAV 175
           FGC  GT E L C +     ER P +
Sbjct: 66  FGCLVGTPETLRCQREGFFHEREPCI 91


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 663 SVVKNTLTATFSPRHLASHTPRNALSR 583
           S+VKN L+  F+  HLAS +  N LSR
Sbjct: 278 SIVKNCLSYCFNLYHLASKS--NQLSR 302


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 663 SVVKNTLTATFSPRHLASHTPRNALSR 583
           S+VKN L+  F+  HLAS +  N LSR
Sbjct: 278 SIVKNCLSYCFNLYHLASKS--NQLSR 302


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 645 LTATFSPRHLASHTPRNALSRWTPPSV 565
           ++ +F    L S+TP++  +R+ PPS+
Sbjct: 3   MSRSFLVDSLISNTPKDMNARYLPPSL 29


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 83  SNGTCVTQVGGY 118
           +NGTC+ +VGG+
Sbjct: 271 NNGTCLDKVGGF 282


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 292 RLHPQLSEPSPDVTESPGVRPPITSS 369
           ++ P +   +  + ES   +PP+TSS
Sbjct: 100 QIRPPILHDTQPMCESLNTQPPVTSS 125


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 292 RLHPQLSEPSPDVTESPGVRPPITSS 369
           ++ P +   +  + ES   +PP+TSS
Sbjct: 100 QIRPPILHDTQPMCESLNTQPPVTSS 125


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 292 RLHPQLSEPSPDVTESPGVRPPITSS 369
           ++ P +   +  + ES   +PP+TSS
Sbjct: 100 QIRPPILHDTQPMCESLNTQPPVTSS 125


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 496 CSEIFQGRALACRYSSKGLLPNKYRWWS 579
           CS+  Q +    R   + L+ NK  WW+
Sbjct: 73  CSKCSQRQKDGSRTIIRYLIKNKRDWWN 100


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 496 CSEIFQGRALACRYSSKGLLPNKYRWWS 579
           CS+  Q +    R   + L+ NK  WW+
Sbjct: 73  CSKCSQRQQDGSRTIIRYLIKNKRDWWN 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,851
Number of Sequences: 336
Number of extensions: 2766
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)