Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0102
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      69   2e-13
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       57   6e-10
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          53   7e-09

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 68.5 bits (160), Expect = 2e-13
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 489 ADMFRNISGSGSGLPLLVQRTVAKQIQMVESIGKGRYGE 605
           AD+    SGSGSGLPLLVQRT+AKQIQMV S+GKGRYGE
Sbjct: 234 ADLVEQTSGSGSGLPLLVQRTIAKQIQMVHSVGKGRYGE 272



 Score = 55.6 bits (128), Expect = 1e-09
 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = +2

Query: 80  LSNGTCVTQVGGYCFVAVEEVLD-ESGSVVLDRTAGCLSADE-SGLMQCKSSQV-PHQHP 250
           L NGTC T+ GG CFV+VE VLD E+  +V + + GC+S ++  GL+QCK   V P  H 
Sbjct: 84  LQNGTCETRPGGSCFVSVEAVLDEETKQLVPEYSHGCMSPEQGGGLLQCKVGTVSPQLHG 143

Query: 251 K 253
           K
Sbjct: 144 K 144



 Score = 47.2 bits (107), Expect = 5e-07
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +2

Query: 605 VWLARWRGEKVAVKVFFTTEEAS 673
           VWLA+WR EKVAVK+FFTTEE+S
Sbjct: 273 VWLAKWRDEKVAVKIFFTTEESS 295



 Score = 29.1 bits (62), Expect = 0.13
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 256 IECCYDDDLCNLRLHPQLSEPSPDVTESPGVRPP 357
           I CC ++DLCN  L P  S P    T  P +  P
Sbjct: 146 IVCCDNEDLCNQDLQPPYS-PRTTTTPEPPLADP 178


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 56.8 bits (131), Expect = 6e-10
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = +3

Query: 510 SGSGSGLPLLVQRTVAKQIQMVESIGKGRYGE 605
           SGSGSGLPLL+QRT+AKQ+ + E IG+GRYGE
Sbjct: 133 SGSGSGLPLLIQRTLAKQVSLCECIGRGRYGE 164



 Score = 33.5 bits (73), Expect = 0.006
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 605 VWLARWRGEKVAVKVFFTTEEAS 673
           VW   W GE VAVK+FF+ +E S
Sbjct: 165 VWRGIWHGESVAVKIFFSRDEDS 187


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 53.2 bits (122), Expect = 7e-09
 Identities = 25/33 (75%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
 Frame = +3

Query: 510 SGSGS-GLPLLVQRTVAKQIQMVESIGKGRYGE 605
           SGSGS GLPLLVQR++A+QIQ+V+ IGKGR+GE
Sbjct: 40  SGSGSSGLPLLVQRSIARQIQLVDVIGKGRFGE 72



 Score = 37.5 bits (83), Expect = 4e-04
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 605 VWLARWRGEKVAVKVFFTTEEAS 673
           VW  RWRGE VAVK+F + EE S
Sbjct: 73  VWRGRWRGENVAVKIFSSREECS 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,716
Number of Sequences: 2352
Number of extensions: 12504
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)