Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0102
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          31   0.013
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    31   0.013
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          30   0.023
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.7  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.7  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 536 TRPKDCCQTNTDGGVHRERALRGVW 610
           +RP++  QT +  G+HR++ L  VW
Sbjct: 47  SRPREPAQTTSKAGIHRKKVLLSVW 71


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 536 TRPKDCCQTNTDGGVHRERALRGVW 610
           +RP++  QT +  G+HR++ L  VW
Sbjct: 169 SRPREPAQTTSKAGIHRKKVLLSVW 193


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 29.9 bits (64), Expect = 0.023
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 536 TRPKDCCQTNTDGGVHRERALRGVW 610
           +RP++  QT +  G+HR++ L  VW
Sbjct: 48  SRPRESAQTTSKAGIHRKKVLLLVW 72


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 206 GLMQCKSSQVPHQHPKESSAVTTTTCA 286
           GL+QC +S         +S +TTTT A
Sbjct: 767 GLLQCATSNYSTTRWPATSVITTTTGA 793


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 456 RLQEAAVSTSAADMFRNISGSGSGLPLLVQ 545
           +L +AA S +A    RN+  S   +PL V+
Sbjct: 201 KLAKAAASKAALAKLRNVHSSSFCIPLPVR 230


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 9   ASEYVNVYQCAPTVTYP 59
           A++ + +Y C P  TYP
Sbjct: 224 ATKVLKMYACCPNDTYP 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,453
Number of Sequences: 438
Number of extensions: 3202
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)