Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0101
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  

>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 627 ATVWKPSETTPLVAVAVTKIVESVLQKNN 713
           A VW  SET   +   VT  +  ++Q NN
Sbjct: 340 AIVWITSETCEEIVAGVTTYLVILIQFNN 368


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 521 QDVSGRSDGNTVPGSVRDRPKAKSH 447
           Q++ G++ G     + R+RP+A  H
Sbjct: 299 QEIPGQNPGEKTNIAPRERPRATDH 323


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 580 WLFLDGIALSLWFVVTQLFGN 642
           ++ +   A +L+F++ QLFG+
Sbjct: 164 YIIIVSFATNLYFIIIQLFGS 184


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +3

Query: 540 LGVVGIITAFNFPVAVFGWNSAIAMVCGDA 629
           L +  ++  F       GW S ++   GDA
Sbjct: 95  LAIADLLVTFLMMPLEIGWASTVSWYAGDA 124


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +3

Query: 540 LGVVGIITAFNFPVAVFGWNSAIAMVCGDA 629
           L +  ++  F       GW S ++   GDA
Sbjct: 95  LAIADLLVTFLMMPLEIGWASTVSWYAGDA 124


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 230 HFCYHFAICRTIRLNYLAVCFPFSVKNSNIVFF*T 126
           +F Y F       L +++V F   VK   + FF T
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT 330


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 230 HFCYHFAICRTIRLNYLAVCFPFSVKNSNIVFF*T 126
           +F Y F       L +++V F   VK   + FF T
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT 330



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 200  TIRLNYLAVCFPFSVKNSNIVF 135
            T++ +YL + +PF VK +NI +
Sbjct: 1287 TLKKDYLHIKWPFGVK-TNITY 1307


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 230 HFCYHFAICRTIRLNYLAVCFPFSVKNSNIVFF*T 126
           +F Y F       L +++V F   VK   + FF T
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT 330


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 230 HFCYHFAICRTIRLNYLAVCFPFSVKNSNIVFF*T 126
           +F Y F       L +++V F   VK   + FF T
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFT 330



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 200  TIRLNYLAVCFPFSVKNSNIVF 135
            T++ +YL + +PF VK +NI +
Sbjct: 1287 TLKKDYLHIKWPFGVK-TNITY 1307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,562
Number of Sequences: 336
Number of extensions: 4238
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)