Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0101
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 119 3e-27
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 54 2e-07
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 52 4e-07
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 52 5e-07
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 44 1e-04
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 44 1e-04
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 43 3e-04
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 42 5e-04
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 42 5e-04
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 37 0.015
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 36 0.045
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 31 0.96
03_02_0878 + 12088119-12088233,12088511-12088608,12088689-120887... 31 0.96
01_06_1477 + 37645143-37647425 30 2.2
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129... 30 2.2
03_04_0001 - 16208401-16208778 29 3.9
02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203 29 3.9
12_01_0725 + 6428572-6428817 29 5.1
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 29 5.1
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 29 5.1
07_01_0355 + 2597592-2598280,2599150-2599426 28 6.8
06_01_0627 - 4567304-4567521,4567649-4567727,4567827-4568165,456... 28 6.8
04_03_0810 - 19902049-19902069,19902195-19902400,19902523-199025... 28 6.8
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704 28 6.8
09_01_0080 - 1168032-1168046,1168374-1168431,1168516-1168631,116... 28 9.0
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 119 bits (286), Expect = 3e-27
Identities = 48/79 (60%), Positives = 64/79 (81%)
Frame = +3
Query: 492 VPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
+P H+++E WNPLGVVG+ITAFNFP AV GWN+ IA+VCG+ VWK + TTPL+ +
Sbjct: 165 IPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 224
Query: 672 AVTKIVESVLQKNNIPGAI 728
A+TKIV SVL++NN+PG+I
Sbjct: 225 AMTKIVASVLERNNLPGSI 243
Score = 105 bits (253), Expect = 3e-23
Identities = 50/71 (70%), Positives = 58/71 (81%)
Frame = +1
Query: 301 LPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTL 480
+PAP RGE+VRQIGDALR L LG+LVSLEMGKILPE IGEV E I +CD A+GLSR L
Sbjct: 101 IPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQL 160
Query: 481 PGTVFPSERPD 513
G++ PSERP+
Sbjct: 161 NGSIIPSERPN 171
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 102 KYSFLKDLGLKENNVGVFN-GKWKANGEVIKSYSPANGK 215
++ FL +LGL N G F G W +G V+ S +P N +
Sbjct: 8 EHQFLAELGLAPRNPGSFACGAWGGSGPVVTSTNPTNNQ 46
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 492 VPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
VP HV + P+GV G I +NFP+ +F W A+ CG+A V K +E TPL A+
Sbjct: 196 VPADGPHHVQVLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTPLSAL 254
Query: 672 AVTKIVESVLQKNNIPGAIASL 737
V S+L + +P + ++
Sbjct: 255 ----FVASLLHEAGLPDGVLNV 272
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 492 VPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
VP HV + P+GV G I +NFP+ +F W A+ CG+ V K +E TPL A+
Sbjct: 192 VPADGPHHVQVLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSAL 250
Query: 672 AVTKIV 689
+K++
Sbjct: 251 FASKLL 256
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +3
Query: 492 VPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
+P S L+ P+GVVG +T +NFP+A+ A+ CG V KPSE TPL A+
Sbjct: 202 IPPTLSDRRLLVLKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 261
Query: 672 AVTKI 686
A +
Sbjct: 262 AAADL 266
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI-VESVLQK 707
PLGV I FNFP + W IA+ CG+ V KPSE P A+ + ++ +E+ L K
Sbjct: 159 PLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGAAMMLAELAMEAGLPK 216
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESV 698
P+GVVG+IT +N+P+ + W A A+ G V KPSE L + + I +
Sbjct: 153 PIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEI 206
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
P+GVVG+I +NFP +F + A+ G V KP+E TPL A+
Sbjct: 164 PIGVVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKPAEQTPLSAL 208
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
PLGV G+I +NFP +F + A+ G V KP+E TPL A+
Sbjct: 183 PLGVAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKPAEQTPLSAL 227
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
P+GVVG I +N+P +F + ++ A+ G V KP+E TPL A+
Sbjct: 156 PVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAEQTPLSAL 200
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESVLQKNNI 716
PLGVV +I+A+N+P + A+ G+A V KPSE P + K++ + + I
Sbjct: 118 PLGVVLVISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPATSALFAKLLPEYVDSSCI 177
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 35.5 bits (78), Expect = 0.045
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIV 689
PLGVV +I+A+N+P + A+ G+A V KPSE P + + +++
Sbjct: 89 PLGVVLVISAWNYPFLLSIDPIIGAIAAGNAVVLKPSEVAPATSSLLAELL 139
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKP 644
PLGVV I FN+PV + A++ G+A V KP
Sbjct: 161 PLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKP 196
>03_02_0878 +
12088119-12088233,12088511-12088608,12088689-12088795,
12088900-12088974,12089053-12089124,12089221-12089382,
12089476-12089550,12089635-12089706,12089813-12089884,
12090150-12090224,12090329-12090400,12090491-12090625,
12090712-12091187,12091270-12091779,12091876-12092111,
12092200-12092712
Length = 954
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 249 IMGVRQ-CGTGSVACVGGTARACKRRGR*TNRRCSKGKPSATWKASVIRNG 398
I+G+ CG VA VG A +R R R G P A+WK S R G
Sbjct: 547 IIGIAAGCGVLVVALVGAAVYALVQRRRAQKAREELGGPFASWKRSEERGG 597
>01_06_1477 + 37645143-37647425
Length = 760
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -1
Query: 733 DAMAPGMLFFCSTLSTILVTATATSGVVSDGFQTVASPQTIAIALF----HPKTATGKLK 566
D MAPG L S ++ V TS ++A+P +A HP+ + ++
Sbjct: 497 DIMAPGSLVLASWAESVAVVGNMTSPFNIISGTSMATPHAAGVAALLRAVHPEWSPAAIR 556
Query: 565 AVMMPT 548
+ MM T
Sbjct: 557 SAMMTT 562
>01_06_0944 +
33211652-33212427,33212492-33212660,33212825-33212936,
33213061-33213159,33213237-33213394,33214911-33215062,
33215162-33215249,33215399-33215476,33215516-33215690,
33216701-33217002
Length = 702
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -1
Query: 715 MLFFCSTLSTILVTATATSGVVSDGFQTVASPQTIAIALFHPKTATGKLKAVMMPTTPS 539
+L C STI + + +SDG V++ +T + F P T+T + + P+
Sbjct: 24 VLSTCCLSSTITTDSLLPNKQISDGQTIVSANETFTLGFFSPGTSTYRYVGIWYSNVPN 82
>03_04_0001 - 16208401-16208778
Length = 125
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 628 ASPQTIAIALFHPKTATGKLKAVMMPTTPSG 536
ASP+ +A+AL P+ ++ A PT+ SG
Sbjct: 37 ASPEAVAVALVLPRADPAEVAATAFPTSGSG 67
>02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203
Length = 740
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 547 TPSGFHFSIRTCPDALTGTQYRGVCG 470
TP GF TCPD G Y G CG
Sbjct: 304 TPGGFTC---TCPDKTIGNAYNGTCG 326
>12_01_0725 + 6428572-6428817
Length = 81
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 458 LWVCPAHSPVLCSRQSVRTRPDRKMEPAWCCWHHNSLQLSCGC 586
++V +P +R++++ RP +EP+ CC H S ++ C
Sbjct: 30 VYVHAVTTPPSQNRRALQVRPSPVVEPSGCCSGHRSEAVASWC 72
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 570 NFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESV 698
N+P+ + W A A+ G V KPSE + + + + + V
Sbjct: 183 NYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADVCKEV 225
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 523 SKNGTRLVLLAS*QPSTFLWLFLDGIALSLWFVVTQLF 636
+++G +V+ + ST +W+FL + SLW F
Sbjct: 558 TESGWSMVVAVQKETSTSMWIFLQPLTTSLWLASLAFF 595
>07_01_0355 + 2597592-2598280,2599150-2599426
Length = 321
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 226 SAITLPFAGL*DLITSPFAFHFPLKTPTLFSFKPKSFKNEYFGSSMRKAVDALR 65
S I+L FAG+ L+ + A F TP +K S+ +F +S+ DA++
Sbjct: 249 STISLGFAGMQVLVCTFVAVRFEGATPAEAIYKNLSYLEVFFKTSLLAVGDAVK 302
>06_01_0627 -
4567304-4567521,4567649-4567727,4567827-4568165,
4568202-4568239,4568462-4568837
Length = 349
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 541 LVLLAS*QPSTFLWLFLDGIALSLWFVVTQLFGNH 645
LVL + ST W+FL + LWF LF H
Sbjct: 89 LVLAKNESESTTKWVFLKPLTKELWFATMILFPIH 123
>04_03_0810 -
19902049-19902069,19902195-19902400,19902523-19902559,
19902623-19902675,19903149-19903226,19903496-19903586,
19903773-19903917,19903988-19904227,19904313-19904523,
19904788-19905232
Length = 508
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 588 FGWNSAIAMVCGDATVWKPSETT 656
FGW+ M+C D+ W SE T
Sbjct: 363 FGWSDLSKMICSDSQSWTFSEET 385
>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
Length = 748
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 547 TPSGFHFSIRTCPDALTGTQYRGVC 473
TP GF S CPD TG Y G C
Sbjct: 321 TPGGFRCS---CPDKTTGNAYFGTC 342
>09_01_0080 -
1168032-1168046,1168374-1168431,1168516-1168631,
1169310-1169368,1169832-1169880,1170314-1170378,
1170477-1170564,1171212-1171277
Length = 171
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 126 GLKENNVGVF---NGKWKANGEVIKSYSPANGKVIAEVQAGS 242
GL N +F + WK E+ + S NGKVIA+V S
Sbjct: 92 GLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYS 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,344,516
Number of Sequences: 37544
Number of extensions: 475795
Number of successful extensions: 1522
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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