Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0101
(742 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 3e-24
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 59 3e-09
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 55 7e-08
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 54 2e-07
SB_36729| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 47 2e-05
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 45 7e-05
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 38 0.011
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 37 0.015
SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012) 29 3.0
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 29 3.0
SB_33542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_11680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_45285| Best HMM Match : AT_hook (HMM E-Value=0.13) 29 4.0
SB_38911| Best HMM Match : Laminin_G_2 (HMM E-Value=0.85) 29 5.2
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 28 6.9
SB_43594| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_3940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 109 bits (261), Expect = 3e-24
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +1
Query: 298 ELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRT 477
E P P RGEVVRQIG ALRE L PLGKL+SLE+GKI PE +GE+ EYI VCD A+GLSR
Sbjct: 68 ETPGPKRGEVVRQIGHALREKLTPLGKLLSLEVGKIFPEGVGEIQEYIDVCDYAVGLSRM 127
Query: 478 LPGTVFPSERP 510
G VFPSERP
Sbjct: 128 FDGKVFPSERP 138
Score = 83.4 bits (197), Expect = 2e-16
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +3
Query: 495 PVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVW 638
P GH L+E+WNP+G VG+ITAFNFPVAVFGWN+AI+M CG+ +W
Sbjct: 134 PSERPGHALLEQWNPVGTVGVITAFNFPVAVFGWNTAISMTCGNVNIW 181
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +3
Query: 75 STAFLIEDPKYSFLKDLGLKENNVGVFNGKWKANGEVIKSYSPANGKVIAEV 230
S A LIE+ KYS+L++LGLK +N GV+NG W GE + P G+V+ ++
Sbjct: 33 SGALLIENEKYSWLRELGLKADNPGVYNGTWGGKGE---TPGPKRGEVVRQI 81
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESVLQKNNI 716
P+GVVGIIT +NFP A W A A+ G+A VWKP+ P A A+T+I+ + N+
Sbjct: 141 PVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPANQVPASAWALTEII----SRQNL 196
Query: 717 PGAIASL 737
P +L
Sbjct: 197 PAGTFNL 203
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 316 RGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGE 426
R V+ IGD L LG +++ E GK L E +GE
Sbjct: 67 RYSVLMAIGDELIARKDELGAILAREEGKTLAEGVGE 103
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +3
Query: 507 SGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 686
+G + PLGVVG I A+N+P+ W A A+ CG+ V+KPS TP+ AVA+ I
Sbjct: 400 NGSFAYTRREPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLTPMNAVALADI 459
Query: 687 V 689
+
Sbjct: 460 L 460
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESV 698
P+GVVG IT +NFP+ + G A A+ CG + KP+E TPL A+ + +V+ V
Sbjct: 1337 PVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAEQTPLTALYLASLVKEV 1390
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 301 LPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTL 480
+ A ARG + ++ D + L +L S + GK++ EA +V I G + +
Sbjct: 1259 MDASARGHFLYKLADLCERDADYLARLESYDGGKVINEAKIDVQGMIGCFRYYAGWADKV 1318
Query: 481 PGTVFPSERP 510
G P++ P
Sbjct: 1319 TGKTIPADGP 1328
>SB_36729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +3
Query: 75 STAFLIEDPKYSFLKDLGLKENNVGVFNGKWKANGE 182
S A LIE+ KYS+L++LGLK +N GV+NG W GE
Sbjct: 33 SGALLIENEKYSWLRELGLKADNPGVYNGTWGGKGE 68
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVE 692
P+G+VG IT +NFP+ + A A+ CG+ + KP+E TPL A+ +V+
Sbjct: 467 PVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAEQTPLTALYFCALVK 518
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/70 (17%), Positives = 35/70 (50%)
Frame = +1
Query: 301 LPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTL 480
+ A RG+++ ++ + ++ L L +++ GK+ +++G++ + G + +
Sbjct: 389 MDASMRGKLLYKLAQLIDRDIAYLASLETIDSGKLFSDSVGDMQSSANCFRYYAGWADKV 448
Query: 481 PGTVFPSERP 510
G P++ P
Sbjct: 449 TGKTIPADGP 458
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 540 LGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 686
+GVVG I A+NFP+ + W A+ G TV KP+E TPL A+ + ++
Sbjct: 188 VGVVGAIVAWNFPLLLACWKLGPALATGCTTVLKPAEDTPLTALKLAEL 236
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +3
Query: 516 VLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 686
VLI K P+GV IT +NFP+A+ ++ A+ CG + +PS TPL A+A+ ++
Sbjct: 75 VLITK-EPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPSGQTPLSALALGEL 130
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +1
Query: 307 APARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTLPG 486
A R ++R+ D + EN+ + K+++LE GK L EA GEV+ + + ++ + G
Sbjct: 4 AKERSIILRKWYDLILENIDDIAKIITLESGKPLLEARGEVLYAANYIEFFSEEAKRVYG 63
Query: 487 TVFPSERP 510
+ PS P
Sbjct: 64 DIIPSNNP 71
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 522 IEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 686
++ W P+GVVG I +NFP+ + W A+ G+ V KP+ T L A+ +I
Sbjct: 762 MQGWKPVGVVGGIVPWNFPLMLLCWKVCPALAMGNTVVLKPATYTRLSALLFAEI 816
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +3
Query: 528 KWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESVLQK 707
K PLGV II+A+N+PV + A+ G+ V KPSE A V +V L
Sbjct: 69 KNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLVADLVPKYLDP 128
Query: 708 NNIP 719
+ P
Sbjct: 129 DCYP 132
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 534 NPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIV 689
+P GV G+I+ +N P+ + + A A+ G V KPSE T + A + +++
Sbjct: 145 SPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTSVTAWMMAELI 196
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 516 VLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVE 692
++++ N L + +NFP+ + +A A+ G + KPSE TP A+A+ ++ E
Sbjct: 132 LILQHQNELAELLTTEQWNFPLGMITRKAAAALAAGCTVIIKPSEETPFCALALQQLAE 190
>SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012)
Length = 281
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 45 YIRVPMARNASTAFLIEDPKYSFLKDLGLKENNVGVFNGKWKANG 179
YIR P ARNA + E+ + D E N G + +WK NG
Sbjct: 21 YIRNPAARNACKQYGFEECIIEWTMD----EKNCGGLSAQWKDNG 61
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = -1
Query: 700 STLSTILVTATAT-----SGVVSDGFQTVASPQTIAIALFHPKTATGKLKAVMMPTTPS 539
S TI V AT T +G S ++T+A T +I+L +TA+ + + + +TPS
Sbjct: 741 SVYETIAVNATPTISPSPNGTTSSVYETIAVNATPSISLSTNETASSPYETIAVNSTPS 799
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = -1
Query: 700 STLSTILVTAT-----ATSGVVSDGFQTVASPQTIAIALFHPKTATGKLKAVMMPTTPSG 536
S TI V AT + +G S ++T+A T +I+L +TA+ + + + TP
Sbjct: 626 SVYETIAVNATPIISPSPNGTTSSVYETIAVNATPSISLSTNETASSPYETIAVNATP-- 683
Query: 535 FHFSIRTCPDALTGTQYRGVC-GTDPKLSHTREYTRS 428
+I P+ T + Y + + P +S + T S
Sbjct: 684 ---TIYPSPNRTTSSMYETIAVNSTPSISPSPNGTTS 717
>SB_33542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 66 RNASTAFLIEDPKYSFLKDLGLKENNVGVFNGKWKANGEVI 188
R ST F ++ K F+ GL+ NV V G N EVI
Sbjct: 25 RFLSTLFPLQTKKKRFITHFGLRSRNVLVMTGNAHRNPEVI 65
>SB_11680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 661 SGVVSDGFQTVASPQTIAIALFHPKTATGKLKAVMMPTTPSG 536
SG T + PQ I++ P+T G L V +TPSG
Sbjct: 17 SGEKHKRMHTSSYPQGTRISILAPQTTNGTLLGVQRASTPSG 58
>SB_45285| Best HMM Match : AT_hook (HMM E-Value=0.13)
Length = 440
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 548 NTKRVPFFDQDVSGRSDGNTVPGSVRD---RPKAKSHT*IYSITSPIASGRILPISNDTS 378
+T + FD+D+S SD + PG+ + + ++K T + A G + +S +
Sbjct: 289 HTSDLSSFDEDLSSESDNESTPGAKEESMPQDRSKPRTNKTNDIKKQAHGEMNKVSKHAT 348
Query: 377 FPSG*RFSLR 348
PSG SL+
Sbjct: 349 KPSGDSDSLK 358
>SB_38911| Best HMM Match : Laminin_G_2 (HMM E-Value=0.85)
Length = 131
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESVLQKNNI 716
P GV ++T FPVA WN + D+T + T + +A VES + K I
Sbjct: 36 PSGVSSVVTT-PFPVAT--WNRVTLAILDDSTTFISVNDTSVFQLAYKGSVESSVNKRVI 92
Query: 717 PG 722
G
Sbjct: 93 FG 94
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/83 (27%), Positives = 32/83 (38%)
Frame = -3
Query: 698 HTFYNFSHSHGYERCCF*WFPNSCVTTNHSDSAIPSKNSHRKVEGCYDANNTKRVPFFDQ 519
H ++N H GY+R C P C T+ P S+ + G +N + +
Sbjct: 257 HHYHNLHHRRGYKRYCL--QPQFC-TSIPDGRRGPDLFSYDALVGSSPMSNCEHAFKVAR 313
Query: 518 DVSGRSDGNTVPGSVRDRPKAKS 450
D G VRDRP KS
Sbjct: 314 DSLGVDSLLDAEDVVRDRPDKKS 336
>SB_43594| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 342
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 36 SLRYIRVPMAR-NASTAFLIEDPKYSFLKDLGLKENNVGVFNGKWKANGEVIKSY 197
S R +P+A A L+ D K F KD+ L+ + WK E I Y
Sbjct: 52 SSRKYAIPIAELTTEMAKLLRDVKVFFTKDINLERKGSPISPSTWKKANERILCY 106
>SB_3940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 275 RKRGMRGRNCPRLQEARSLD 334
RKR ++G N P +QE RS D
Sbjct: 8 RKRTLKGENRPEIQETRSYD 27
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,883,948
Number of Sequences: 59808
Number of extensions: 551098
Number of successful extensions: 1402
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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