Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0101
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 141 5e-34
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 141 5e-34
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 52 3e-07
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 49 3e-06
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 49 4e-06
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 44 8e-05
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 44 1e-04
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 43 2e-04
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 42 6e-04
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 42 6e-04
At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar ... 41 7e-04
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 41 7e-04
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 40 0.002
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 31 0.61
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 31 0.61
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 31 0.80
At3g19230.1 68416.m02440 leucine-rich repeat family protein cont... 31 1.1
At1g26620.1 68414.m03242 expressed protein ; expression supporte... 31 1.1
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 30 1.4
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 30 1.4
At2g45770.1 68415.m05693 signal recognition particle receptor pr... 29 2.4
At2g20950.4 68415.m02474 expressed protein 28 5.7
At2g20950.3 68415.m02473 expressed protein 28 5.7
At2g20950.2 68415.m02472 expressed protein 28 5.7
At2g20950.1 68415.m02471 expressed protein 28 5.7
At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing ... 28 7.5
At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing ... 28 7.5
At2g15860.1 68415.m01818 expressed protein and genefinder 27 9.9
At1g72090.1 68414.m08333 radical SAM domain-containing protein /... 27 9.9
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 141 bits (341), Expect = 5e-34
Identities = 78/219 (35%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Frame = +3
Query: 102 KYSFLKDLGLKENNVGVF-NGKWKANGEVIKSYSPANGKVIAEVQAGSAPI--MGVRQCG 272
+Y FL ++GL +N+G + GKW+ANG ++ + +PAN + IA+V S G++ C
Sbjct: 7 EYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQGLKACE 66
Query: 273 TGSVACVGGTARACKRRGR*TNR--RCSKGKPSATWKASVIRNG*NPAXXXXXXXXXXXX 446
+ + TA +RG + + K + + G A
Sbjct: 67 EAAKIWMQVTA---PKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDM 123
Query: 447 XXLSFGSVPHTPRYCVPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGD 626
+ G +P H+++E WNPLG+VG+ITAFNFP AV GWN+ IA+VCG+
Sbjct: 124 CDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGN 183
Query: 627 ATVWKPSETTPLVAVAVTKIVESVLQKNNIPGAI-ASLC 740
VWK + TTPL+ +A+TK+V VL+KNN+PGAI ++C
Sbjct: 184 CVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMC 222
Score = 98.3 bits (234), Expect = 5e-21
Identities = 47/72 (65%), Positives = 57/72 (79%)
Frame = +1
Query: 298 ELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRT 477
++ AP RG++VRQIGDALR L LG+L+SLEMGKIL E IGEV E I +CD A+GLSR
Sbjct: 74 QVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQ 133
Query: 478 LPGTVFPSERPD 513
L G+V PSERP+
Sbjct: 134 LNGSVIPSERPN 145
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 141 bits (341), Expect = 5e-34
Identities = 78/219 (35%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Frame = +3
Query: 102 KYSFLKDLGLKENNVGVF-NGKWKANGEVIKSYSPANGKVIAEVQAGSAPI--MGVRQCG 272
+Y FL ++GL +N+G + GKW+ANG ++ + +PAN + IA+V S G++ C
Sbjct: 7 EYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQGLKACE 66
Query: 273 TGSVACVGGTARACKRRGR*TNR--RCSKGKPSATWKASVIRNG*NPAXXXXXXXXXXXX 446
+ + TA +RG + + K + + G A
Sbjct: 67 EAAKIWMQVTA---PKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDM 123
Query: 447 XXLSFGSVPHTPRYCVPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGD 626
+ G +P H+++E WNPLG+VG+ITAFNFP AV GWN+ IA+VCG+
Sbjct: 124 CDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGN 183
Query: 627 ATVWKPSETTPLVAVAVTKIVESVLQKNNIPGAI-ASLC 740
VWK + TTPL+ +A+TK+V VL+KNN+PGAI ++C
Sbjct: 184 CVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMC 222
Score = 98.3 bits (234), Expect = 5e-21
Identities = 47/72 (65%), Positives = 57/72 (79%)
Frame = +1
Query: 298 ELPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRT 477
++ AP RG++VRQIGDALR L LG+L+SLEMGKIL E IGEV E I +CD A+GLSR
Sbjct: 74 QVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQ 133
Query: 478 LPGTVFPSERPD 513
L G+V PSERP+
Sbjct: 134 LNGSVIPSERPN 145
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/79 (40%), Positives = 41/79 (51%)
Frame = +3
Query: 492 VPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
+P S L+ P+GVVG IT +NFP+A+ A+ G V KPSE TPL A+
Sbjct: 173 IPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTAL 232
Query: 672 AVTKIVESVLQKNNIPGAI 728
A E LQ PGA+
Sbjct: 233 AA---AELALQAGVPPGAL 248
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 301 LPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEV 429
L A R +V+R+ D L + + LG+L++LE GK L EAIGEV
Sbjct: 109 LTAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEV 151
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIV 689
P+GV G I +NFP+ + W A+ CG+ V K +E TPL A+ V K++
Sbjct: 191 PIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLL 241
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 686
P+GV G I +NFP+ +F W A+ CG+ V K +E TPL A K+
Sbjct: 195 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKL 244
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +3
Query: 510 GHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIV 689
G++L E P+GVVG+IT +N+P+ + W A ++ G + KPSE L + + I
Sbjct: 145 GYILKE---PIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLTCLELADIC 201
Query: 690 ESV 698
V
Sbjct: 202 REV 204
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESV 698
PLGVVG+IT +N+P+ + W A ++ G + KPSE + + + I V
Sbjct: 151 PLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVTCLELADICREV 204
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 686
PLGV I FNFP + W +A+ CG+ + KPSE P +V + ++
Sbjct: 249 PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAEL 298
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESVLQKNNI 716
PLGVV +I+A+N+P + A+ G+A V KPSE P + +TK++E L + +
Sbjct: 112 PLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAV 171
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVESVLQKNNI 716
PLGVV +I+A+N+P + A+ G+A V KPSE P + +TK++E L + +
Sbjct: 112 PLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAV 171
>At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 390
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +3
Query: 471 PHTPRYCVPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSE 650
P T + V S ++ + PLGVV +I+A+NFP + A+ G+A V KPSE
Sbjct: 155 PETVKTSVTTFPSSAQIVSE--PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSE 212
Query: 651 TTPLVAVAVTKIVESVLQKNNI 716
P + + K+ L I
Sbjct: 213 IAPAASSLLAKLFSEYLDNTTI 234
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +3
Query: 471 PHTPRYCVPVRASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSE 650
P T + V S ++ + PLGVV +I+A+NFP + A+ G+A V KPSE
Sbjct: 155 PETVKTSVTTFPSSAQIVSE--PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSE 212
Query: 651 TTPLVAVAVTKIVESVLQKNNI 716
P + + K+ L I
Sbjct: 213 IAPAASSLLAKLFSEYLDNTTI 234
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 671
P+GVVG I +NFP +F A AM G V KP+E T L A+
Sbjct: 158 PIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSAL 202
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKP 644
PLGVV I FN+PV + A A++ G++ V KP
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 193
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 537 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKP 644
PLGVV I FN+PV + A A++ G++ V KP
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 193
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +3
Query: 504 ASGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTK 683
A G V+ E P G V +++++NFP+++ A+ G+ + K SE +P + + K
Sbjct: 100 AKGKVISE---PYGTVLVLSSWNFPISLSLDPLIGAIAAGNTVLLKSSELSPNASAFLAK 156
Query: 684 IVESVLQKNNI 716
+ + L I
Sbjct: 157 TIPAYLDTKAI 167
>At3g19230.1 68416.m02440 leucine-rich repeat family protein
contains Pfam profile:PF00560 LRR:Leucine Rich Repeat
domains; similar to light repressible receptor protein
kinase (GI:1321686)[Arabidopsis thaliana]
Length = 519
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 81 AFLIEDPKYSFLKDLGLKENNVGVFNGKWKANGEVIKSYSPA 206
AF + SFL+ L + N V V++G+W +G+ + +PA
Sbjct: 289 AFDVSVNGLSFLRKLNVSTNGVMVYSGQWPLSGQTQITLTPA 330
>At1g26620.1 68414.m03242 expressed protein ; expression supported
by MPSS
Length = 867
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -3
Query: 638 PNSCVTTNHSDSAIPSKNSHRKVEGCYDANNTKRVPFFDQDVSGRSDGNTVPGSVRD-RP 462
P S TT+HS + +HR++E + T +V +D V S +T P SV D RP
Sbjct: 256 PQSYPTTDHSKVKFSGERAHRELE---VRSKTPQVS-YDSYVES-SVASTAPRSVNDYRP 310
Query: 461 KAKSHT*IYSITSPIASGRILPISNDTSFP 372
+ +T +SGR + SN S+P
Sbjct: 311 EF-----FKPLTHWSSSGRTMTSSNQKSYP 335
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +3
Query: 501 RASGHVLIEK-----WNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLV 665
R+SG ++ K ++PLGV+G I +N+P A+ G+ V K SE
Sbjct: 171 RSSGRAMLHKVSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWS 230
Query: 666 AVAVTKIVESVLQKNNIP 719
+I+++ L P
Sbjct: 231 GCFYFRIIQAALAAVGAP 248
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +3
Query: 501 RASGHVLIEK-----WNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLV 665
R+SG ++ K ++PLGV+G I +N+P A+ G+ V K SE
Sbjct: 171 RSSGRAMLHKVSRVEFHPLGVIGAIVPWNYPFHNIFNPMLAAVFSGNGIVIKVSEHASWS 230
Query: 666 AVAVTKIVESVLQKNNIP 719
+I+++ L P
Sbjct: 231 GCFYFRIIQAALAAVGAP 248
>At2g45770.1 68415.m05693 signal recognition particle receptor
protein, chloroplast (FTSY) similar to Cell division
protein ftsY homolog (SP:O67066) {Aquifex aeolicus};
contains Pfam PF00448: SRP54-type protein, GTPase domain
contains TIGRFAM TIGR00064: signal recognition
particle-docking protein FtsY contains Pfam PF02881:
SRP54-type protein, helical bundle domain; identical to
cDNA chloroplast FtsY homolog GI:4583547
Length = 366
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 309 RGQFRPRMPRFLCRTG 262
RG+FRPRM RF C G
Sbjct: 29 RGEFRPRMTRFRCSAG 44
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 624 HHKP*R*RYSIQKQPQES*RLL*CQQHQAGSIFRSGRVRTL*REHSTGE 478
H +P RYS ++P+E + + + +GS FRS R RT R + E
Sbjct: 80 HQRPPVYRYSTPERPREPDEDVTPRSNGSGSPFRSARTRTPDRRKRSSE 128
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 624 HHKP*R*RYSIQKQPQES*RLL*CQQHQAGSIFRSGRVRTL*REHSTGE 478
H +P RYS ++P+E + + + +GS FRS R RT R + E
Sbjct: 80 HQRPPVYRYSTPERPREPDEDVTPRSNGSGSPFRSARTRTPDRRKRSSE 128
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 624 HHKP*R*RYSIQKQPQES*RLL*CQQHQAGSIFRSGRVRTL*REHSTGE 478
H +P RYS ++P+E + + + +GS FRS R RT R + E
Sbjct: 80 HQRPPVYRYSTPERPREPDEDVTPRSNGSGSPFRSARTRTPDRRKRSSE 128
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 624 HHKP*R*RYSIQKQPQES*RLL*CQQHQAGSIFRSGRVRTL*REHSTGE 478
H +P RYS ++P+E + + + +GS FRS R RT R + E
Sbjct: 80 HQRPPVYRYSTPERPREPDEDVTPRSNGSGSPFRSARTRTPDRRKRSSE 128
>At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 578
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +2
Query: 479 SPVLCSRQSVRTRPDRKMEPAWC-CWHHNSLQLSCGCFWME*RYRYGLW*RNCLETIRNN 655
SP R + TR + C C H L+L C CF Y G NC + N
Sbjct: 99 SPNSMPRPAGETRDGTPQKKKQCNCKHSRCLKLYCECF-ASGTYCDGCNCVNCFNNVENE 157
Query: 656 TARSRGCD 679
AR + +
Sbjct: 158 PARRQAVE 165
>At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 571
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +2
Query: 479 SPVLCSRQSVRTRPDRKMEPAWC-CWHHNSLQLSCGCFWME*RYRYGLW*RNCLETIRNN 655
SP R + TR + C C H L+L C CF Y G NC + N
Sbjct: 99 SPNSMPRPAGETRDGTPQKKKQCNCKHSRCLKLYCECF-ASGTYCDGCNCVNCFNNVENE 157
Query: 656 TARSRGCD 679
AR + +
Sbjct: 158 PARRQAVE 165
>At2g15860.1 68415.m01818 expressed protein and genefinder
Length = 512
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +3
Query: 90 IEDPKYSFLKDLGLK--ENNVGVF-NGKWKANGEVIKSYSPANGKVIAEVQAGSAPIMGV 260
+E L GLK +++V F +G W+A G +K + K+ VQ GS+P
Sbjct: 124 LEGASEESLLSQGLKVFDDSVESFTSGAWQAFGNALKGGTSLVQKLENSVQQGSSP---- 179
Query: 261 RQCGTGSVACVGGTARACKRRG 326
R+ G+G+ + + T +A +G
Sbjct: 180 REAGSGAPSLL-ETGKALTAKG 200
>At1g72090.1 68414.m08333 radical SAM domain-containing protein /
TRAM domain-containing protein contains Pfam profiles
PF00919: UPF0004 family protein, PF04055: radical SAM
domain protein, PF01938: TRAM domain
Length = 601
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 159 GKWKANGEVIKSYSPANGKVIAEVQAG---SAPIMGVRQCGTGSVAC-VGGTARACKRRG 326
G+W GEVI+++S AN + + + S+ + C + +C + AC G
Sbjct: 478 GRWSVFGEVIETFSSANRETKSREETKLPCSSNVSTCETCTCSAESCGEERSGEACNISG 537
Query: 327 R*TNRRCSKGK 359
+ + +KGK
Sbjct: 538 NISGQDDNKGK 548
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,992,708
Number of Sequences: 28952
Number of extensions: 374486
Number of successful extensions: 1113
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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