Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0099
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    79   8e-14
UniRef50_UPI0000513AB7 Cluster: PREDICTED: similar to TD and POZ...    34   3.8  
UniRef50_Q54P36 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 79.4 bits (187), Expect = 8e-14
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = -2

Query: 470 LADLTNFVVPQSISKRPKLLYKINFKQTKGIRPTGDTSKEKQNC 339
           LAD  +FVVPQSI+KRPK LYKIN KQTKGIR TGDTSKEKQNC
Sbjct: 22  LADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNC 65


>UniRef50_UPI0000513AB7 Cluster: PREDICTED: similar to TD and POZ
           domain containing 5; n=1; Apis mellifera|Rep: PREDICTED:
           similar to TD and POZ domain containing 5 - Apis
           mellifera
          Length = 381

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 426 FTYRLRHYEVCQVSKLLIKILRYGRFFPLGYPSAD-SHKELRSNKNIELLMLI 581
           F   ++H+E C VS+ ++++  Y     LGY      H+ L+ N  + L++ I
Sbjct: 93  FNADVKHWEYCHVSRTILELKSYTDIISLGYRDLSIVHRHLKKNGEVVLMVKI 145


>UniRef50_Q54P36 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 242

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 384 FCLFKVYFIQKLRSFTYRLRHY 449
           FC+F V+F+ K +SF YR  HY
Sbjct: 9   FCIFFVFFVYKTQSFEYREYHY 30


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,708,865
Number of Sequences: 1657284
Number of extensions: 9576673
Number of successful extensions: 18871
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18869
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)