Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0097
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.3  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          23   3.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.3  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   5.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   5.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   7.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 463 PCPLPPLAPQMYSLRIFCSSKSTVF 389
           PC  PP APQ  +L +    +STVF
Sbjct: 313 PCTQPPSAPQ--NLTVNFVDQSTVF 335


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
 Frame = +2

Query: 611 YDGYYLTMTRRGGITLTQ----DTFPIGFY 688
           Y GYY TMT   G+   Q      FPI  Y
Sbjct: 292 YPGYYPTMTYSNGLPFPQRPIWSNFPIYKY 321


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
 Frame = +2

Query: 611 YDGYYLTMTRRGGITLTQ----DTFPIGFY 688
           Y GYY TMT   G+   Q      FPI  Y
Sbjct: 292 YPGYYPTMTYSNGLPFPQRPIWSNFPIYKY 321


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 175 NNMFDEDADACYAPSXNTPIVH 240
           N  FD D D  +APS NT I H
Sbjct: 15  NVSFDID-DPDFAPSKNTTITH 35


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 348 QPKYYFYPFKKGSGK 392
           +P +Y YP  +G GK
Sbjct: 170 EPSFYIYPSLQGDGK 184


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 348 QPKYYFYPFKKGSGK 392
           +P +Y YP  +G GK
Sbjct: 170 EPSFYIYPSLQGDGK 184


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +2

Query: 86  GCSRGNCQYWSRPR*PRNSSLAYPEPSALTTTCSMKTPMPV 208
           GC+ G  +Y+ + R P  +   +   ++   + + KT +PV
Sbjct: 406 GCNAGPAKYYLKSRDPERTPYQWDNSTSAGFSQTNKTWLPV 446


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 354 KYYFYPFKKGSGKTVDFDEQKM 419
           K Y Y  K    KT+ FD   M
Sbjct: 44  KAYIYTIKSNMAKTLQFDVHMM 65


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 778 PSPADGHGGHGP 743
           PSP  GH GH P
Sbjct: 115 PSPGMGHMGHTP 126


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 421 VRSTSVARVVGGGMARCRG 477
           +R+TS+A+   GG+ +C G
Sbjct: 165 LRNTSIAKSEFGGITQCIG 183


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +2

Query: 149 AYPEPSALTTTCSMKTPMPVMHPP*TRL*SI*RRPLRTVESHHFSGKSPRFL 304
           ++P   +L T     TP P       R   I R   RT + H  + K PR L
Sbjct: 149 SFPRGGSLPTPV---TPTPTTVQQLLRRAQIRRNERRTPDPHDETAKKPRVL 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,900
Number of Sequences: 438
Number of extensions: 5498
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)