Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0096
         (816 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   1.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   7.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.8  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 552 CRGRVSSGQECRRAGRFRRELVCKCC 475
           CRGR SS  +   +  ++ E  C CC
Sbjct: 53  CRGRCSSYLQVSGSKIWQMERSCMCC 78


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 728 YGWHIYVVDVYSSSNHLTP 784
           Y WH +V DV+    +  P
Sbjct: 402 YRWHAFVDDVFQEHKNTLP 420


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 574 NNTKRLVVSWPRVVRAGVSESGSVSSRARV*MLFIGDR 461
           ++T  L V+W R V   +  S S +  +++ ++  GD+
Sbjct: 497 SSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDK 534


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 574 NNTKRLVVSWPRVVRAGVSESGSVSSRARV*MLFIGDR 461
           ++T  L V+W R V   +  S S +  +++ ++  GD+
Sbjct: 535 SSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDK 572


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 498 DETDPLSDTPALTTRGHDTTSRLVLLQRKTN-SINMIDFTGGRTSCESA 641
           +E+  +   P +T  GH    +  LL    N SI   +F GG T C  A
Sbjct: 137 NESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIAKSEF-GGITQCIGA 184


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -1

Query: 789  PPGVKWLLEL*TSTT*MCHPYSYNGCPALQTETHY 685
            PP   +L    T+     H +  NGCP L     Y
Sbjct: 1502 PPAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQY 1536


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -1

Query: 789  PPGVKWLLEL*TSTT*MCHPYSYNGCPALQTETHY 685
            PP   +L    T+     H +  NGCP L     Y
Sbjct: 1498 PPAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQY 1532


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,323
Number of Sequences: 438
Number of extensions: 4796
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)