Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0095
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.87 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.6  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   6.1  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 600 FIRYIFNFLKFHGTHKNLHPFKISNLNLLVL 692
           F+ YI +   F        PF ISN++L+ L
Sbjct: 215 FVNYIDDLFFFRFEKSKFEPFLISNISLVSL 245


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 573  YVYSLI*KKKVVKYLNLCFQIDI 505
            ++ SLI +KK+VK+L+     DI
Sbjct: 1173 WICSLIHRKKIVKFLDGIMAFDI 1195


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +3

Query: 618 NFLKFHGTHKNLHPFKISNLNLLVLSITTEHKTKSLSLSLN--PYVCLNV 761
           N L F G    L    + N++L  +   +     SLSL+ N  P V L V
Sbjct: 436 NGLSFQGLEYTLLHLNLDNVSLSQVPALSTPNLLSLSLAFNSLPTVALEV 485


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 355 FIKNYILLPECD 320
           FI+ ++L PEC+
Sbjct: 6   FIRKFVLCPECE 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,219
Number of Sequences: 336
Number of extensions: 4357
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)