Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0095
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019843-1|AAH19843.1|  205|Homo sapiens chromosome 12 open read...    77   7e-14
AK025068-1|BAB15058.1|  205|Homo sapiens protein ( Homo sapiens ...    77   7e-14
AK222983-1|BAD96703.1|  205|Homo sapiens hypothetical protein FL...    75   2e-13
BC142684-1|AAI42685.1|  907|Homo sapiens deafness, autosomal rec...    33   1.1  
BC142614-1|AAI42615.1|  907|Homo sapiens deafness, autosomal rec...    33   1.1  
AL138895-3|CAI17246.1|  907|Homo sapiens deafness, autosomal rec...    33   1.1  
AL138895-2|CAI17245.1|  524|Homo sapiens deafness, autosomal rec...    33   1.1  
AL138895-1|CAI17244.1|  556|Homo sapiens deafness, autosomal rec...    33   1.1  
AK022854-1|BAB14275.1|  556|Homo sapiens protein ( Homo sapiens ...    33   1.1  
AB040959-1|BAA96050.1|  963|Homo sapiens KIAA1526 protein protein.     33   1.1  

>BC019843-1|AAH19843.1|  205|Homo sapiens chromosome 12 open reading
           frame 49 protein.
          Length = 205

 Score = 77.0 bits (181), Expect = 7e-14
 Identities = 35/83 (42%), Positives = 48/83 (57%)
 Frame = +1

Query: 1   RKDVTKNGCCDPEADFTERYXXXXXXXXXXXVEYEHCVSCCLDPGKRDMLEIVLSKLSTE 180
           RKD+  NGCC+     T++Y             YE+CVSCCL P K+ +LE  L++ +  
Sbjct: 95  RKDLLVNGCCNVNVPSTKQYCCDGCWPNGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVA 154

Query: 181 KSILFRSLTDDYELCLTKCRTSS 249
              LF ++ D +ELCL KCRTSS
Sbjct: 155 FQNLFMAVEDHFELCLAKCRTSS 177



 Score = 37.1 bits (82), Expect = 0.068
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 255 VLHENSYKDPTHKHCFGDEPP 317
           V HEN+Y+DP  K+C+G+ PP
Sbjct: 180 VQHENTYRDPIAKYCYGESPP 200


>AK025068-1|BAB15058.1|  205|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21415 fis, clone COL04030. ).
          Length = 205

 Score = 77.0 bits (181), Expect = 7e-14
 Identities = 35/83 (42%), Positives = 48/83 (57%)
 Frame = +1

Query: 1   RKDVTKNGCCDPEADFTERYXXXXXXXXXXXVEYEHCVSCCLDPGKRDMLEIVLSKLSTE 180
           RKD+  NGCC+     T++Y             YE+CVSCCL P K+ +LE  L++ +  
Sbjct: 95  RKDLLVNGCCNVNVPSTKQYCCDGCWPNGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVA 154

Query: 181 KSILFRSLTDDYELCLTKCRTSS 249
              LF ++ D +ELCL KCRTSS
Sbjct: 155 FQNLFMAVEDHFELCLAKCRTSS 177



 Score = 37.1 bits (82), Expect = 0.068
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 255 VLHENSYKDPTHKHCFGDEPP 317
           V HEN+Y+DP  K+C+G+ PP
Sbjct: 180 VQHENTYRDPIAKYCYGESPP 200


>AK222983-1|BAD96703.1|  205|Homo sapiens hypothetical protein
           FLJ21415 variant protein.
          Length = 205

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 35/83 (42%), Positives = 47/83 (56%)
 Frame = +1

Query: 1   RKDVTKNGCCDPEADFTERYXXXXXXXXXXXVEYEHCVSCCLDPGKRDMLEIVLSKLSTE 180
           RKD+  NGCC+     T++Y             YE+CVSCCL P K+  LE  L++ +  
Sbjct: 95  RKDLLVNGCCNVNVPSTKQYCCDGCWPNGCCSAYEYCVSCCLQPNKQLPLERFLNRAAVA 154

Query: 181 KSILFRSLTDDYELCLTKCRTSS 249
              LF ++ D +ELCL KCRTSS
Sbjct: 155 FQNLFMAVEDHFELCLAKCRTSS 177



 Score = 37.1 bits (82), Expect = 0.068
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 255 VLHENSYKDPTHKHCFGDEPP 317
           V HEN+Y+DP  K+C+G+ PP
Sbjct: 180 VQHENTYRDPIAKYCYGESPP 200


>BC142684-1|AAI42685.1|  907|Homo sapiens deafness, autosomal
           recessive 31 protein.
          Length = 907

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 498 LNEYQFGSIN*GILLLFFFKLMNTHSKY 581
           L+EY+ GS++   L++  FKL+NTH+K+
Sbjct: 446 LDEYRGGSVSVEALVMALFKLLNTHAKF 473


>BC142614-1|AAI42615.1|  907|Homo sapiens deafness, autosomal
           recessive 31 protein.
          Length = 907

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 498 LNEYQFGSIN*GILLLFFFKLMNTHSKY 581
           L+EY+ GS++   L++  FKL+NTH+K+
Sbjct: 446 LDEYRGGSVSVEALVMALFKLLNTHAKF 473


>AL138895-3|CAI17246.1|  907|Homo sapiens deafness, autosomal
           recessive 31 protein.
          Length = 907

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 498 LNEYQFGSIN*GILLLFFFKLMNTHSKY 581
           L+EY+ GS++   L++  FKL+NTH+K+
Sbjct: 446 LDEYRGGSVSVEALVMALFKLLNTHAKF 473


>AL138895-2|CAI17245.1|  524|Homo sapiens deafness, autosomal
           recessive 31 protein.
          Length = 524

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 498 LNEYQFGSIN*GILLLFFFKLMNTHSKY 581
           L+EY+ GS++   L++  FKL+NTH+K+
Sbjct: 63  LDEYRGGSVSVEALVMALFKLLNTHAKF 90


>AL138895-1|CAI17244.1|  556|Homo sapiens deafness, autosomal
           recessive 31 protein.
          Length = 556

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 498 LNEYQFGSIN*GILLLFFFKLMNTHSKY 581
           L+EY+ GS++   L++  FKL+NTH+K+
Sbjct: 95  LDEYRGGSVSVEALVMALFKLLNTHAKF 122


>AK022854-1|BAB14275.1|  556|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12792 fis, clone NT2RP2002032. ).
          Length = 556

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 498 LNEYQFGSIN*GILLLFFFKLMNTHSKY 581
           L+EY+ GS++   L++  FKL+NTH+K+
Sbjct: 95  LDEYRGGSVSVEALVMALFKLLNTHAKF 122


>AB040959-1|BAA96050.1|  963|Homo sapiens KIAA1526 protein protein.
          Length = 963

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 498 LNEYQFGSIN*GILLLFFFKLMNTHSKY 581
           L+EY+ GS++   L++  FKL+NTH+K+
Sbjct: 502 LDEYRGGSVSVEALVMALFKLLNTHAKF 529


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,135,233
Number of Sequences: 237096
Number of extensions: 2188708
Number of successful extensions: 2889
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2889
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)