Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0095
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070573-1|AAL48044.1|  212|Drosophila melanogaster RE11751p pro...    73   6e-13
AE014298-2172|AAF48472.1|  212|Drosophila melanogaster CG15643-P...    73   6e-13

>AY070573-1|AAL48044.1|  212|Drosophila melanogaster RE11751p
           protein.
          Length = 212

 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   RKDVTKNGCCDPEADFTERYXXXXXXXXXXXVE-YEHCVSCCLDPGKRDMLEIVLSKLST 177
           R++V  NGCC+ E      Y              YE+CVSCCL PG++ +LE VL   +T
Sbjct: 97  REEVLTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERVLQAPNT 156

Query: 178 EKSILFRSLTDDYELCLTKCRTSSY 252
            K I F S+TD +ELCL KCRT+S+
Sbjct: 157 PKYI-FASVTDHFELCLVKCRTNSH 180



 Score = 32.7 bits (71), Expect = 0.56
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 255 VLHENSYKDPTHKHCFG 305
           V HEN Y+DP  KHC+G
Sbjct: 182 VEHENKYRDPAAKHCYG 198


>AE014298-2172|AAF48472.1|  212|Drosophila melanogaster CG15643-PA
           protein.
          Length = 212

 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   RKDVTKNGCCDPEADFTERYXXXXXXXXXXXVE-YEHCVSCCLDPGKRDMLEIVLSKLST 177
           R++V  NGCC+ E      Y              YE+CVSCCL PG++ +LE VL   +T
Sbjct: 97  REEVLTNGCCNLELPGIGYYSCRTCNTSTHCCGVYEYCVSCCLHPGQQPLLERVLQAPNT 156

Query: 178 EKSILFRSLTDDYELCLTKCRTSSY 252
            K I F S+TD +ELCL KCRT+S+
Sbjct: 157 PKYI-FASVTDHFELCLVKCRTNSH 180



 Score = 32.7 bits (71), Expect = 0.56
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 255 VLHENSYKDPTHKHCFG 305
           V HEN Y+DP  KHC+G
Sbjct: 182 VEHENKYRDPAAKHCYG 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,663,588
Number of Sequences: 53049
Number of extensions: 645283
Number of successful extensions: 1221
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)