Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0095
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    32   0.39 
AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical ...    31   0.89 
Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        28   6.3  
U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z77133-3|CAB00868.2|  149|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 606  RYIF--NFLKFHGTHKNLHPFKISNLNLLVLSITTEHKTKSLSLSL 737
            R++F  N+L  HGT   L  F ++N N ++ ++TT+ K   +S S+
Sbjct: 1767 RFLFQINWLDVHGTDSQLTLFPLANYNYVLRNLTTDIKVADVSDSI 1812


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 606  RYIF--NFLKFHGTHKNLHPFKISNLNLLVLSITTEHKTKSLSLSL 737
            R++F  N+L  HGT   L  F ++N N ++ ++TT+ K   +S S+
Sbjct: 1767 RFLFQINWLDVHGTDSQLTLFPLANYNYVLRNLTTDIKVADVSDSI 1812


>AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical
           protein T22B2.3 protein.
          Length = 385

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -1

Query: 378 SQVNSIIDLLKITFCYLNVTQVAHHRNNAYVLDLCK 271
           SQ+ SI D L I FC + +    +H N  YV  + K
Sbjct: 340 SQLPSIFDFLSIFFCIIRIFLEVYHTNKNYVESVIK 375


>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 570 HSKYLMNFYLFIRYIF---NFLKFHGTHKNL 653
           H KY+ N YL  + I+   +FL+F+ T+K L
Sbjct: 186 HGKYITNVYLVTKLIYMTNSFLQFYSTNKFL 216


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 570 HSKYLMNFYLFIRYIF---NFLKFHGTHKNL 653
           H KY+ N YL  + I+   +FL+F+ T+K L
Sbjct: 186 HGKYITNVYLVTKLIYMTNSFLQFYSTNKFL 216


>U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical
           protein F26F12.3c protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 145 CPSCLDLSNMIHNVH-IQRSNCFYYKIHSC 59
           CPSC  L ++ HN +    S+C+   IH C
Sbjct: 388 CPSCKQLVHIDHNTNEFNTSSCYSCGIHWC 417


>U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical
           protein F26F12.3b protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 145 CPSCLDLSNMIHNVH-IQRSNCFYYKIHSC 59
           CPSC  L ++ HN +    S+C+   IH C
Sbjct: 545 CPSCKQLVHIDHNTNEFNTSSCYSCGIHWC 574


>U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical
           protein F26F12.3a protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 145 CPSCLDLSNMIHNVH-IQRSNCFYYKIHSC 59
           CPSC  L ++ HN +    S+C+   IH C
Sbjct: 630 CPSCKQLVHIDHNTNEFNTSSCYSCGIHWC 659


>Z77133-3|CAB00868.2|  149|Caenorhabditis elegans Hypothetical
           protein K03A11.5 protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 339 FCYLNVTQVAHHRNNAYVLDLCKN 268
           F   N T V HH  + Y  D+CKN
Sbjct: 27  FSNANTTCVCHHNPSDYPYDICKN 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,018,669
Number of Sequences: 27780
Number of extensions: 364756
Number of successful extensions: 768
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)