Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0095
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   7.1  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   9.4  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 158 SYQNFQQRRAFSSAH*QMTMNYVL--QSVEQAHI 253
           S   FQQRRAF      + +  V+  QS EQ  +
Sbjct: 203 SLTEFQQRRAFLETRQSLEVQLVIEEQSTEQERL 236


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 56  RSVKSASGSQQPFFVT 9
           R V +A  SQ+PF++T
Sbjct: 598 RGVNAAIRSQEPFYIT 613


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 493 KVVISQYQTMKHTLVLGLFVNVFK 422
           K ++ QY  +KH+  LG    V +
Sbjct: 440 KAMVKQYVKVKHSATLGYISRVLE 463


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 455 CMFHRLVL*NYN 490
           C+FHRL L N N
Sbjct: 59  CLFHRLALMNDN 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,268
Number of Sequences: 438
Number of extensions: 4899
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)