Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0094
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.8  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 158 KDIINSHDTLFLDIKPFCVTECH 226
           K ++ +H+      KPF   ECH
Sbjct: 147 KHVLQNHERTHTGEKPFECQECH 169


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 402 QLFGWKLSQHVITFYDST 349
           +L+ + LS HVIT  D T
Sbjct: 206 KLYDYDLSSHVITILDWT 223


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = +2

Query: 569 VWFFFVINFTENNFQFKNLCETAYV*HIIIY 661
           +++F+ ++ T N      LC   +  H++ Y
Sbjct: 56  IYYFYCVSITFNVHLLFLLCSGYFTVHLLFY 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,396
Number of Sequences: 336
Number of extensions: 2759
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)