Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0093
         (856 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I321 Cluster: Putative uncharacterized protein PFI064...    36   0.98 
UniRef50_Q460N5 Cluster: Poly [ADP-ribose] polymerase 14; n=23; ...    36   1.3  
UniRef50_Q7YX07 Cluster: Putative uncharacterized protein srx-89...    35   3.0  
UniRef50_Q0DJS3 Cluster: Os05g0233900 protein; n=7; Oryza sativa...    34   4.0  
UniRef50_Q7RSJ8 Cluster: Putative uncharacterized protein PY0035...    34   4.0  
UniRef50_UPI0000498AE8 Cluster: hypothetical protein 45.t00013; ...    33   6.9  
UniRef50_P78325 Cluster: ADAM 8 precursor; n=21; Eutheria|Rep: A...    33   9.2  

>UniRef50_Q8I321 Cluster: Putative uncharacterized protein PFI0640c;
           n=3; Plasmodium|Rep: Putative uncharacterized protein
           PFI0640c - Plasmodium falciparum (isolate 3D7)
          Length = 789

 Score = 36.3 bits (80), Expect = 0.98
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +2

Query: 611 YLTHKNSIRWRNIVSL*TYSNTNVIF*IIFVVYNLSKICNILII 742
           YLT   +I++ N VS  +Y N N+I+ II ++Y  + + NI II
Sbjct: 689 YLTIDLAIKYINAVSKLSYKNVNIIYKIIEIIYQTNHLHNIKII 732


>UniRef50_Q460N5 Cluster: Poly [ADP-ribose] polymerase 14; n=23;
           Euteleostomi|Rep: Poly [ADP-ribose] polymerase 14 - Homo
           sapiens (Human)
          Length = 1720

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 21/109 (19%), Positives = 53/109 (48%)
 Frame = +3

Query: 225 TLKPAVHALRTLRDRPRASVYMATSSRLVAFVRSRKRVGFLRSSQRVWESRERACTHSFV 404
           T++PA   +     RPR   + A +S  ++ +RS+ +V  ++    +W++ +       +
Sbjct: 284 TIRPAATLVN--EGRPRIKTWQADTSTTLSSIRSKYKVNPIKVDPTMWDTIKNDVKDDRI 341

Query: 405 LVVCQLRKFLLGPSQRASEVQSIRVCLHGVVSCRALRDERHTRQRDERV 551
           L+     K ++  + ++ +VQSI V +  ++     + +R  +   E++
Sbjct: 342 LIEFDTLKEMVILAGKSEDVQSIEVQVRELIESTTQKIKREEQSLKEKM 390


>UniRef50_Q7YX07 Cluster: Putative uncharacterized protein srx-89;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein srx-89 - Caenorhabditis elegans
          Length = 319

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 18/63 (28%), Positives = 34/63 (53%)
 Frame = -2

Query: 825 WDFGIASSKFIYLGNKYHVIYRKIHRLLIINILQIFDRL*TTKII*NITFVLLYVYKLTM 646
           W+  ++ S  +YLGN+Y +I   ++R   +   Q + ++   K    I   L YVY+LT+
Sbjct: 92  WNINLSMS--LYLGNEYQIILVALNRFFALFFPQFYSKIFAIKPS-LIVICLFYVYRLTI 148

Query: 645 FLH 637
            ++
Sbjct: 149 VIY 151


>UniRef50_Q0DJS3 Cluster: Os05g0233900 protein; n=7; Oryza
           sativa|Rep: Os05g0233900 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 685

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 444 SQRASEVQSIRVCLHGVVSCRALRDERHTRQRDERVQP 557
           + R  EVQS++ C +   +   LR ERH   +DE+  P
Sbjct: 497 NNRFDEVQSVKQCANAANNLERLRTERHMAMQDEKTSP 534


>UniRef50_Q7RSJ8 Cluster: Putative uncharacterized protein PY00357;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00357 - Plasmodium yoelii yoelii
          Length = 1095

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 221 SNFKAGCACSSNTARQAEGQCVHGNL 298
           SN K  C C  N  +  EG+CVH NL
Sbjct: 832 SNGKGECVCKDNFYKNGEGKCVHNNL 857


>UniRef50_UPI0000498AE8 Cluster: hypothetical protein 45.t00013;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 45.t00013 - Entamoeba histolytica HM-1:IMSS
          Length = 1242

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +1

Query: 535 NETSVYSRLKNLLMVYSYL--FDARFALLNSQKLNTMEKHC 651
           N +S Y+ LKNL  +YS L  F+  F+++NS+ +N +   C
Sbjct: 664 NYSSFYTSLKNLKWIYSSLNSFETPFSIINSKPINFLNIPC 704


>UniRef50_P78325 Cluster: ADAM 8 precursor; n=21; Eutheria|Rep: ADAM
           8 precursor - Homo sapiens (Human)
          Length = 824

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 245 CSSNTARQAEG-QCVHGNLVSSCGFRSLSEACR 340
           C+S T + AEG QC HG     C  +   E CR
Sbjct: 435 CNSTTCQLAEGAQCAHGTCCQECKVKPAGELCR 467


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,675,593
Number of Sequences: 1657284
Number of extensions: 15158798
Number of successful extensions: 38949
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38938
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)