Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0093
         (856 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   7.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.4  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 47  ISYPDKYYEFESVYR 91
           +  P+KYYE + VYR
Sbjct: 772 VPIPNKYYEAKQVYR 786


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 128 ILSLVSSIHNCAANATKYANSV 193
           +L +V  +HN   N  + ANS+
Sbjct: 210 LLDIVHGVHNELCNLCQVANSI 231


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 3   SEQTAGPRIFRALEILVTLTSTTNLNQYTEK 95
           SEQ  G  +     ++ TL +T  +N Y  K
Sbjct: 375 SEQQWGILVLIIAPLIATLIATVTVNYYRHK 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,079
Number of Sequences: 336
Number of extensions: 3951
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)