Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0093
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ063585-1|AAY64450.1| 1517|Homo sapiens B-aggressive lymphoma 2... 36 0.19
DQ063584-1|AAY64449.1| 1638|Homo sapiens B-aggressive lymphoma 2... 36 0.19
D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein pro... 33 1.3
BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein. 33 1.3
AY008763-1|AAG33252.1| 574|Homo sapiens sentrin/SUMO-specific p... 31 5.3
X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal... 31 7.1
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal... 31 7.1
AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by m... 31 7.1
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m... 31 7.1
AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by m... 31 7.1
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m... 31 7.1
>DQ063585-1|AAY64450.1| 1517|Homo sapiens B-aggressive lymphoma 2A
protein.
Length = 1517
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/109 (19%), Positives = 53/109 (48%)
Frame = +3
Query: 225 TLKPAVHALRTLRDRPRASVYMATSSRLVAFVRSRKRVGFLRSSQRVWESRERACTHSFV 404
T++PA + RPR + A +S ++ +RS+ +V ++ +W++ + +
Sbjct: 202 TIRPAATLVN--EGRPRIKTWQADTSTTLSSIRSKYKVNPIKVDPTMWDTIKNDVKDDRI 259
Query: 405 LVVCQLRKFLLGPSQRASEVQSIRVCLHGVVSCRALRDERHTRQRDERV 551
L+ K ++ + ++ +VQSI V + ++ + +R + E++
Sbjct: 260 LIEFDTLKEMVILAGKSEDVQSIEVQVRELIESTTQKIKREEQSLKEKM 308
>DQ063584-1|AAY64449.1| 1638|Homo sapiens B-aggressive lymphoma 2B
protein.
Length = 1638
Score = 35.9 bits (79), Expect = 0.19
Identities = 21/109 (19%), Positives = 53/109 (48%)
Frame = +3
Query: 225 TLKPAVHALRTLRDRPRASVYMATSSRLVAFVRSRKRVGFLRSSQRVWESRERACTHSFV 404
T++PA + RPR + A +S ++ +RS+ +V ++ +W++ + +
Sbjct: 202 TIRPAATLVN--EGRPRIKTWQADTSTTLSSIRSKYKVNPIKVDPTMWDTIKNDVKDDRI 259
Query: 405 LVVCQLRKFLLGPSQRASEVQSIRVCLHGVVSCRALRDERHTRQRDERV 551
L+ K ++ + ++ +VQSI V + ++ + +R + E++
Sbjct: 260 LIEFDTLKEMVILAGKSEDVQSIEVQVRELIESTTQKIKREEQSLKEKM 308
>D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein
protein.
Length = 824
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 245 CSSNTARQAEG-QCVHGNLVSSCGFRSLSEACR 340
C+S T + AEG QC HG C + E CR
Sbjct: 435 CNSTTCQLAEGAQCAHGTCCQECKVKPAGELCR 467
>BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein.
Length = 824
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 245 CSSNTARQAEG-QCVHGNLVSSCGFRSLSEACR 340
C+S T + AEG QC HG C + E CR
Sbjct: 435 CNSTTCQLAEGAQCAHGTCCQECKVKPAGELCR 467
>AY008763-1|AAG33252.1| 574|Homo sapiens sentrin/SUMO-specific
protease protein.
Length = 574
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 399 TSVYTRAL*TPRP-FDSSAKNRHASESERKPQDE 301
T+V TR L PRP FD+SA E E + +DE
Sbjct: 56 TTVPTRRLPAPRPSFDASASEEEEEEEEEEDEDE 89
>X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 2896
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 561 KPAVHARLV-VSCASRRVELDTRPHHVNTLVSIELRKPVAMDLEETYVVDRQPKRTSVYT 385
KP H + ++C S+ +DT P LRK +D+EE + R KRT
Sbjct: 1122 KPTTHEKTTKIACRSQPDPVDT-PTSSKPQSKRSLRK---VDVEEEFFALR--KRTPSAG 1175
Query: 384 RAL*TPRPFDSSAKNRHA 331
+A+ TP+P S KN +A
Sbjct: 1176 KAMHTPKPAVSGEKNIYA 1193
>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 3256
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 561 KPAVHARLV-VSCASRRVELDTRPHHVNTLVSIELRKPVAMDLEETYVVDRQPKRTSVYT 385
KP H + ++C S+ +DT P LRK +D+EE + R KRT
Sbjct: 1482 KPTTHEKTTKIACRSQPDPVDT-PTSSKPQSKRSLRK---VDVEEEFFALR--KRTPSAG 1535
Query: 384 RAL*TPRPFDSSAKNRHA 331
+A+ TP+P S KN +A
Sbjct: 1536 KAMHTPKPAVSGEKNIYA 1553
>AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 561 KPAVHARLV-VSCASRRVELDTRPHHVNTLVSIELRKPVAMDLEETYVVDRQPKRTSVYT 385
KP H + ++C S+ +DT P LRK +D+EE + R KRT
Sbjct: 1122 KPTTHEKTTKIACRSQPDPVDT-PTSSKPQSKRSLRK---VDVEEEFFALR--KRTPSAG 1175
Query: 384 RAL*TPRPFDSSAKNRHA 331
+A+ TP+P S KN +A
Sbjct: 1176 KAMHTPKPAVSGEKNIYA 1193
>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 561 KPAVHARLV-VSCASRRVELDTRPHHVNTLVSIELRKPVAMDLEETYVVDRQPKRTSVYT 385
KP H + ++C S+ +DT P LRK +D+EE + R KRT
Sbjct: 1482 KPTTHEKTTKIACRSQPDPVDT-PTSSKPQSKRSLRK---VDVEEEFFALR--KRTPSAG 1535
Query: 384 RAL*TPRPFDSSAKNRHA 331
+A+ TP+P S KN +A
Sbjct: 1536 KAMHTPKPAVSGEKNIYA 1553
>AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 561 KPAVHARLV-VSCASRRVELDTRPHHVNTLVSIELRKPVAMDLEETYVVDRQPKRTSVYT 385
KP H + ++C S+ +DT P LRK +D+EE + R KRT
Sbjct: 1122 KPTTHEKTTKIACRSQPDPVDT-PTSSKPQSKRSLRK---VDVEEEFFALR--KRTPSAG 1175
Query: 384 RAL*TPRPFDSSAKNRHA 331
+A+ TP+P S KN +A
Sbjct: 1176 KAMHTPKPAVSGEKNIYA 1193
>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 561 KPAVHARLV-VSCASRRVELDTRPHHVNTLVSIELRKPVAMDLEETYVVDRQPKRTSVYT 385
KP H + ++C S+ +DT P LRK +D+EE + R KRT
Sbjct: 1482 KPTTHEKTTKIACRSQPDPVDT-PTSSKPQSKRSLRK---VDVEEEFFALR--KRTPSAG 1535
Query: 384 RAL*TPRPFDSSAKNRHA 331
+A+ TP+P S KN +A
Sbjct: 1536 KAMHTPKPAVSGEKNIYA 1553
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,705,441
Number of Sequences: 237096
Number of extensions: 2201867
Number of successful extensions: 4787
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4787
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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