Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0093
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical pr...    35   0.085
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ...    31   1.0  
Z50794-4|CAC35819.1|  396|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z77658-3|CAB01159.1|  112|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF067943-1|AAC17662.2|  322|Caenorhabditis elegans Serpentine re...    29   5.6  
Z81117-3|CAB03318.1|  334|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AC199169-6|ABO33256.1|  502|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    28   9.7  

>Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical
           protein F43A11.3 protein.
          Length = 319

 Score = 34.7 bits (76), Expect = 0.085
 Identities = 18/63 (28%), Positives = 34/63 (53%)
 Frame = -2

Query: 825 WDFGIASSKFIYLGNKYHVIYRKIHRLLIINILQIFDRL*TTKII*NITFVLLYVYKLTM 646
           W+  ++ S  +YLGN+Y +I   ++R   +   Q + ++   K    I   L YVY+LT+
Sbjct: 92  WNINLSMS--LYLGNEYQIILVALNRFFALFFPQFYSKIFAIKPS-LIVICLFYVYRLTI 148

Query: 645 FLH 637
            ++
Sbjct: 149 VIY 151


>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
           protein K10E9.1 protein.
          Length = 1451

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 47  ISYPDKYYEFESVYRKKYLIFE 112
           + YPD+ YEF  +Y+K Y I E
Sbjct: 365 LKYPDRSYEFNKMYKKLYQIME 386


>Z50794-4|CAC35819.1|  396|Caenorhabditis elegans Hypothetical
           protein F59F5.8 protein.
          Length = 396

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 438 LEETYVVD--RQPKRTSVYTRAL*TPRPFDSSAKNRHASESERKPQDETRLPCTHWPSA 268
           L +TY     R P R S + +++      +    NRH++   +KP+ E+R   + W SA
Sbjct: 135 LPDTYCAAFMRNPLRASSFFKSIWNQIETEVLQINRHSATPTQKPRSESRFSISSWRSA 193


>Z77658-3|CAB01159.1|  112|Caenorhabditis elegans Hypothetical
           protein F14D7.3 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +2

Query: 224 NFKAGCACSSNTARQAEGQCVHGNLVSSCGFRSLSEACRFFALESKGLGV*RAR 385
           NF    AC  ++  + E   ++ NL+S+  F + S  C   AL++  LGV  AR
Sbjct: 53  NFYEATACMPSSCNEEEFLNLY-NLISNQNFTACSAICSKAALKTHNLGVSSAR 105


>AF067943-1|AAC17662.2|  322|Caenorhabditis elegans Serpentine
           receptor, class x protein93 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = -2

Query: 813 IASSKFIYLGNKYHVIYRKIHRLLIINILQIFDRL*TTKII*NITFVLLYVYKLTMFLH 637
           I +S  +YLGN+Y ++   I+R   +     + R+ +      I  VL+Y+Y++   ++
Sbjct: 90  INTSHPLYLGNEYQIVLMAINRFCAMFFPTKYSRIFSLSHT-TIILVLIYLYRIAQKIY 147


>Z81117-3|CAB03318.1|  334|Caenorhabditis elegans Hypothetical
           protein T06E6.9 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 812 LRAVNLFIWETNIMLYIGKY 753
           LR++N FIW T+  L++G +
Sbjct: 173 LRSMNFFIWATDFKLFLGSF 192


>AC199169-6|ABO33256.1|  502|Caenorhabditis elegans Hypothetical
           protein F38A1.5 protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = +1

Query: 295 PRLVLWLSFALGSVSVFCA--RVKGSGSLESARV---HTRSFWLSV 417
           PRLV  +SF  G   ++CA   V G  ++E   +    + S+W+SV
Sbjct: 371 PRLVGLISFNYGPQPIYCANPEVSGQNTIELPAIDILSSESYWVSV 416


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
           protein Y41E3.9 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 529 RDNETSVY--SRLKNLLMVYSYLFDARFALLNSQKLNTMEKHCELINIQQYKRDILNYFC 702
           +D+ TS Y  S +KNL    S+ F+A      +  LN  EK  +L    Q+ R +LN F 
Sbjct: 758 QDSLTSSYDISVIKNL----SFAFEAVLPKDENLPLNRQEKLAQLFFNVQWTRTVLNGFL 813

Query: 703 RLQSIENL 726
              S++ L
Sbjct: 814 SQSSVDFL 821


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,198,040
Number of Sequences: 27780
Number of extensions: 374818
Number of successful extensions: 947
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)