Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0092
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   3.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -1

Query: 334 RNKTSINIIPYIKEYNWVWTIYRGYKGLMYGLTRHSTMRCTFT--KCPSAARVIS 176
           RN   +  +P ++   W+W +   Y     G    +  +C +   K PS +  +S
Sbjct: 105 RNLQFVVSLPEVERVQWIWLLIFAYLIPEVGTWIRAVRKCLYKLWKMPSLSEFLS 159


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -1

Query: 334 RNKTSINIIPYIKEYNWVWTIYRGYKGLMYGLTRHSTMRCTFT--KCPSAARVIS 176
           RN   +  +P ++   W+W +   Y     G    +  +C +   K PS +  +S
Sbjct: 105 RNLQFVVSLPEVERVQWIWLLIFAYLIPEVGTWIRAVRKCLYKLWKMPSLSEFLS 159


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 157 WSVVNPLHILLRYDSHDTARCGHSMFIS 74
           W++++ L  +   D+HD  R G S  ++
Sbjct: 289 WNLLDGLDAVAFIDNHDNQRTGGSQILT 316


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 157 WSVVNPLHILLRYDSHDTARCGHSMFIS 74
           W++++ L  +   D+HD  R G S  ++
Sbjct: 290 WNLLDGLDAVAFIDNHDNQRTGGSQILT 317


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 157 WSVVNPLHILLRYDSHDTARCGHSMFIS 74
           W++++ L  +   D+HD  R G S  ++
Sbjct: 290 WNLLDGLDAVAFIDNHDNQRTGGSQILT 317


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 722 WLGTTTLPISAVKNNEFRFEG 784
           WL T+   IS + N+ FRF G
Sbjct: 300 WLDTSHNRISEIPNDLFRFLG 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,739
Number of Sequences: 336
Number of extensions: 4793
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)