Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0092
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      35   0.077
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    35   0.077
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    29   3.8  
Z70683-2|CAA94592.2|  717|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical...    28   8.8  

>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 126 SSICNGLTTLQQRGEFVDMTLAADGHLVKVHRMVLCLVSPYIKPL 260
           S I   +  L+Q  E  D+ L   G +++ HR +L   SPY K +
Sbjct: 95  SKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPYFKAM 139


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 126 SSICNGLTTLQQRGEFVDMTLAADGHLVKVHRMVLCLVSPYIKPL 260
           S I   +  L+Q  E  D+ L   G +++ HR +L   SPY K +
Sbjct: 95  SKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPYFKAM 139


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 120 YRSSICNGLTTLQQRGEFVDMTLAADGHLVKVHRMVLCLVSPY 248
           + +S+   L  L+ R    D+TL      +  HR+VL   SPY
Sbjct: 38  FANSVLQQLGGLKNRDVLCDVTLICGWKRINAHRVVLSACSPY 80


>Z70683-2|CAA94592.2|  717|Caenorhabditis elegans Hypothetical
           protein F13B12.3 protein.
          Length = 717

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -1

Query: 307 PYIKEYNWVWTIYRGYKGLMYGLTRHSTMRCTFTKCPSAA---RVISTNSPRCWSVVNPL 137
           P I +  W W I+      ++G         T +KC SA     VI+ +S +CW   + +
Sbjct: 475 PNITDVVWPWLIFSSGAFEIFGEADEEDKLGTVSKCSSAPLNWDVITDSSVQCWFKTSMI 534

Query: 136 HILL 125
            + L
Sbjct: 535 PVFL 538


>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
            protein Y22D7AR.2 protein.
          Length = 1140

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 223  MRCTFTKCPSAARVISTNSPRCWSVVNPLHILLRYDSH 110
            +   +  CP+ A++I T SP+C  ++ P  + ++ D H
Sbjct: 1091 LHANYVTCPNGAQLILTQSPQC-EILEP-KLAMKGDKH 1126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,281,832
Number of Sequences: 27780
Number of extensions: 419230
Number of successful extensions: 804
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)