Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0091
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.6  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 308 DIFYAGSDCRFPLL*HI 358
           D +Y G +C +P+  H+
Sbjct: 296 DAYYCGGECEYPIPDHM 312


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 159 LCTIYTDAFIY*L*LFGINMLIIKRIYLVRTLRELYICTY 278
           LC  Y   F Y   LF +++L++  IY    +  L+ C +
Sbjct: 236 LCIYY---FYYAFILFTVHLLLLVCIYYFYYMHLLFCCAF 272



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +3

Query: 585 LSFSCSSNFILIYFYKCL*VKIYMHIILVCTLN*FH*RILMKVY 716
           L F C      ++F  C     Y  IIL+C    ++  I+  V+
Sbjct: 83  LLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVH 126


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 393 FIICPLS*QIS*FWIPLSALGS*FQI 470
           F IC L  +   FWI ++  GS F+I
Sbjct: 301 FFICLLPFRALTFWIIVAPAGSNFEI 326


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 395 YYLSAKLTNFIILDTVIGFRLVV 463
           +++  K T   +LDTV+ F +VV
Sbjct: 294 FFILDKSTILKVLDTVVAFLMVV 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,034
Number of Sequences: 336
Number of extensions: 3670
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)