Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0088
(805 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 36 0.038
SB_33702| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 35 0.089
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 33 0.21
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 33 0.27
SB_56827| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 31 1.1
SB_58115| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9) 30 1.9
SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44) 30 1.9
SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34) 30 1.9
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 1.9
SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 30 2.5
SB_56121| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_22339| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_49936| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_40786| Best HMM Match : WSC (HMM E-Value=0.44) 30 2.5
SB_2009| Best HMM Match : Drf_FH1 (HMM E-Value=0.18) 30 2.5
SB_19890| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 29 3.3
SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_36190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_12807| Best HMM Match : Extensin_2 (HMM E-Value=0.56) 29 4.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 4.4
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076) 29 5.8
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 29 5.8
SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 5.8
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 28 7.7
SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12) 28 7.7
SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6) 28 7.7
SB_3839| Best HMM Match : Lep_receptor_Ig (HMM E-Value=6) 28 7.7
SB_58522| Best HMM Match : Spb1_C (HMM E-Value=4) 28 7.7
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 28 7.7
SB_21104| Best HMM Match : SWIM (HMM E-Value=6.5) 28 7.7
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 35.9 bits (79), Expect = 0.038
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERR---P 652
P R+ P ++ S+P+ T + P + + EL SE S VPR R P
Sbjct: 153 PSRSEMPLPPTPSSSSESLPSGTKSPTKPLRSRSSDELVKSNSESSKSNPVPRPRNRPPP 212
Query: 653 DPGASVSMSAISPLSGLG 706
PGAS S ++ P S G
Sbjct: 213 PPGASRSSASKEPSSSWG 230
>SB_33702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 35.9 bits (79), Expect = 0.038
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 500 PRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMS 679
P+ +GL A + P A+ LPP ++ EL R P+P PR + P PG S+S+
Sbjct: 176 PKKNGLQ--ANTPPPRPASPLPPKKSEQGSELG--RPPSKPLPPSPRSKSPMPGQSLSLP 231
Query: 680 AIS-PLSGLGHIPGLSHSHL 736
S GL P +SHL
Sbjct: 232 QRSDSTEGLSVRPA-PYSHL 250
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 34.7 bits (76), Expect = 0.089
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 500 PRASGLDLTAASIPTSTATQLPPAPAD-APVELTTKRSEPSPIPHV-PRERRPDPGASVS 673
P G+D +S P PP PA AP+ + TKR PS + HV PR +RP P
Sbjct: 200 PDHMGVDAFLSSPPPDD----PPTPAPLAPINIGTKRRAPS-VKHVKPRRKRPRPPPPGD 254
Query: 674 MSAIS-PLSGLGHIP 715
+ I+ P G +P
Sbjct: 255 WTVIAVPQQGPVQLP 269
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 485 GRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIP 628
G ++ SG D T A+I + PP P PV +S+P PIP
Sbjct: 1009 GEIMSGSGSGSDTTKATIASPQPPPRPPRPRLIPVRKVHFKSKPRPIP 1056
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPG 661
P R + P S L S+ + +L P + + K EPSP+P P R
Sbjct: 620 PDRLMQPTKSNL---RRSLSSPNLAKLEDVPLRPEINRSAKPVEPSPVPAKPSFTRSTKP 676
Query: 662 ASVSMSAISPLSG 700
++ + +++P+ G
Sbjct: 677 VTLKLDSLNPIHG 689
>SB_56827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 261 RALTPGDKIEAIQRVNDGESKASVARDIGVPESTLRGWCKNEDKLRYM 404
++ T DK++ I +++A R+ GV E+ +R W KN++ L+ M
Sbjct: 6 KSYTANDKLKIIGFAGTNDNRAE-EREYGVNETNIRQWRKNKENLKTM 52
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/111 (24%), Positives = 47/111 (42%)
Frame = +2
Query: 143 HSTYAHKSDNDCPVKNCKQNTRRLAISEWPLWQQRVSAYARSDARRQNRGHTTGQRRRVQ 322
H T H+S P + + T R S + + RS R + H + R +
Sbjct: 39 HETSRHESS---PHETSRHETSRHETSRHERSRHETRQHERS--RHKTSRHESS-RHKTS 92
Query: 323 GIGRTRHRRARVHSARLVQERGQTALHDVTIIVTRHGQEQ*RRASRETCTH 475
GR+RH+ +R ++R + R +T H+ +RH + ++ ET H
Sbjct: 93 RHGRSRHKTSRHETSRHERSRHETRQHE----RSRHKTSRHEKSRHETSRH 139
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 31.1 bits (67), Expect = 1.1
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = -1
Query: 346 PMSRATDALDSPSLTRCMA-----SILSPGVRARIGAYPLLP*WPLAYCEPACVLFTIFD 182
P+ RAT DS SL RC+ S P RI +PL EPA F
Sbjct: 27 PLRRATVPSDSKSLNRCLGLFSYYSQWIPAYSDRIKPITSCKVFPLP--EPAVAAFESIK 84
Query: 181 RAVVIAFMSVR*MDESQPIKI 119
+ V AF+S +DES P ++
Sbjct: 85 KTVEEAFVSA--IDESIPFEV 103
>SB_58115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 248 VSAYARSDARRQNRGHTTGQRRRVQGIGRTRHRRARVHSARLVQERGQTA 397
+ AY + +R +G R+ GIG R R H+ R+V+ RG A
Sbjct: 24 MDAYCKVHLKRLRKGIPLPVPCRICGIGTRSETRLRAHAERIVKGRGCVA 73
>SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9)
Length = 907
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 274 PATKSRPYNGSTTESPRHRSHET*ACQSP 360
P ++R YN +TT P H H T C+SP
Sbjct: 330 PVVRTR-YNTTTTSHPLHHVHATIKCESP 357
>SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)
Length = 2581
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 491 ALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTT--KRSEPSPIPHVPRERRPDPG 661
AL PR L IP TA Q P + PVEL + + +EP +P++ +P PG
Sbjct: 350 ALVPRTVQR-LNEGEIPAETAGQ----PTEGPVELESSPQATEPYVVPNIVPPHQPAPG 403
>SB_35901| Best HMM Match : AT_hook (HMM E-Value=0.34)
Length = 394
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 239 QQRVSAYARSDARRQNRGHTTGQRRRVQGIGRTRHRRAR-VHSARLVQERGQTALHDVTI 415
Q+R + R + R R H Q R +G+ T R R H+ + Q RG T
Sbjct: 142 QERPARGPRETSTRTKRDHQADQERPARGLKETSKRTKRDQHADQERQARGPRETSKWTK 201
Query: 416 IVTRHGQEQ*RRASRET 466
+ GQE+ RET
Sbjct: 202 RDKQEGQERPASRPRET 218
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +2
Query: 515 LDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPR-ERRPDPGASVSMSAISP 691
L + +P T T+LP A P + + P+P P +R PDP +V IS
Sbjct: 467 LSVYKTGVPLPT-TRLPTT-AQTPTTILPPTTTPTPPPTTTEPQRPPDPPRNVQARTISD 524
Query: 692 LS-GLGHIPGLSHSHLGLSFNEIATISRFGATQPG 793
+ IP + LS+N T+S+ G G
Sbjct: 525 SEIEVTWIPPKNTYGKVLSYNMFFTLSKGGIVPKG 559
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 563 PPAPADAPVELTTKRSEPSPIPHVP 637
PP P P L K EP PIP++P
Sbjct: 231 PPPPPSPPRPLAAKLPEPPPIPNMP 255
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 476 RVPGRALTPRASGLDLTAASIPTSTA--TQLPPAPADAPVELTTKRSEPSPIPHVPRERR 649
R+PG A + + S PTS + TQ PP P P PSP P PR
Sbjct: 175 RLPGNARVNAIDQISI-GTSHPTSPSQITQPPPPPPRPPPSPPPPPPPPSPSP--PRPPP 231
Query: 650 PDP 658
P P
Sbjct: 232 PPP 234
>SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 869
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIP 628
PG +AS D+ + +P LPP P +A ++ T+ PSPIP
Sbjct: 297 PGCFAESQASHEDMGSELVPGGMVV-LPPPPMEA-IDFTSSADVPSPIP 343
>SB_56121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1
Query: 283 LSPGVRARIGAYPLLP*WPLAYCEPACVLFT 191
L PGVR G LLP W L Y + + VLFT
Sbjct: 379 LDPGVRQEYGPLHLLPRWTLVYGK-STVLFT 408
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = +2
Query: 449 RASRETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSP-I 625
R CTH PG TP T S P+ T T P+ P +T + +P
Sbjct: 420 RTPSTPCTHSTPGTPSTPSTPSTPST-PSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPST 478
Query: 626 PHVPRERRPDPGASVSMSAISP 691
P P S S + +P
Sbjct: 479 PSTPSTPSTPSTPSTSSTPSTP 500
>SB_22339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1
Query: 283 LSPGVRARIGAYPLLP*WPLAYCEPACVLFT 191
L PGVR G LLP W L Y + + VLFT
Sbjct: 111 LDPGVRQEYGPLHLLPRWTLVYGK-STVLFT 140
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/91 (28%), Positives = 38/91 (41%)
Frame = +2
Query: 428 HGQEQ*RRASRETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKR 607
HG ++ R+ H +P + + + AA T TAT P PA+A TT
Sbjct: 237 HGGKKGRKPGPRPMEHAIPVAPDSTPMTMIPPVAAQPITVTATMAMPTPAEA---ATTAL 293
Query: 608 SEPSPIPHVPRERRPDPGASVSMSAISPLSG 700
PS P P P P +S+ ++ S G
Sbjct: 294 PTPSLAPAAP--ALPVPTSSLPLAKASLRQG 322
>SB_49936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -2
Query: 477 RCVHVSLEARRHCSCPCRVTIIVTSCS-AVCPRSCTSR-AEWTLARLC--LVRPMPWTLR 310
R +L RR+ PCR T+ + C + PR CT R +TL R C +RP +TLR
Sbjct: 49 RTCRYTLRPRRYTLSPCRYTL--SPCRYTLRPRYCTLRPCRYTL-RTCRYTLRPRHYTLR 105
>SB_40786| Best HMM Match : WSC (HMM E-Value=0.44)
Length = 230
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 533 SIPTSTATQLPPAPADAPVELT-TKRSEPSPIPHVPRERRPDPGASVSMSAISPLSGL 703
S PT+ T+ P P T TKR PSP R+P+P ++S LSGL
Sbjct: 117 SSPTNKPTETETLPTTLPTTPTPTKRPSPSPTGTGTPTRKPEP----TLSPTRMLSGL 170
>SB_2009| Best HMM Match : Drf_FH1 (HMM E-Value=0.18)
Length = 323
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2
Query: 464 TCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRE 643
+ TH +PG + T + G+ T +S P +AT P + + K + SP
Sbjct: 121 SATHSLPGISATHSSPGISATHSS-PGISATHSLPGKSRLHIPTRYKSTHSSPGISATHS 179
Query: 644 RRPDPGASVSMSAISPL---SGLGHIPGLSHSH 733
P A+ S+SA L S +PG+S +H
Sbjct: 180 -LPGISATHSLSATHSLPYRSATHSLPGISATH 211
>SB_19890| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 169
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 476 RVPGRALT-PRASGLDLTAASIPTSTATQLPP-APADAPVELTT-KRSE--PSPIPHVPR 640
R P + L P++S + P ++PP AP AP + T+ KR+E P P+ VP
Sbjct: 28 RPPAKPLILPKSSTISTKPPIKPKPAVRRVPPPAPKKAPEDATSPKRNEAAPPPVNEVPP 87
Query: 641 ERRPDP 658
R P
Sbjct: 88 PRPVKP 93
>SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 530 ASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPG 661
A+ P A PP P APV +S+P PH P+ + + G
Sbjct: 209 ATAPKPAANWKPPEPRAAPVP-HKPQSKPKKTPHKPKPPKKEQG 251
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 563 PPAPADAPVEL--TTKRSEPSPIPHVPRER---RPDPGASVSMSAISPLSGLGHIP 715
PP P AP E+ +T R+ P P P ++ P P S S S LG P
Sbjct: 787 PPVPTQAPTEMKSSTARNPPPKKPPNPTKQSATAPTPSTQGSQSPTGSASTLGENP 842
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
Frame = +2
Query: 470 THRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERR 649
T VPG + S P T P AP TT + P P
Sbjct: 278 TPEVPGPTQPTQTKKTTTKPVSQPGETTASTPKAPGPTQPASTTIEATPQPETQPGASTA 337
Query: 650 PDPGA---SVSMSAISP 691
PG+ +VS SA SP
Sbjct: 338 KAPGSTEPTVSQSASSP 354
>SB_36190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 993
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 DARRQNRGHTTGQRRRVQGIGRTRHRRARVHS 364
D+ R+NR T RRV TRHR+A S
Sbjct: 734 DSVRKNRQQTEASGRRVDKADNTRHRKAATKS 765
>SB_12807| Best HMM Match : Extensin_2 (HMM E-Value=0.56)
Length = 430
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -1
Query: 394 SLSSFLHQPRRVDSGTPMSRATDALDSPSLTRCMASILSPGVRARIGAYPLLP*WPLAYC 215
SL ++LH P SG P A D PS +A +S R IG+ P WP+
Sbjct: 299 SLEAYLHWPSMFPSGIP---APDPKRFPSGIPPLAQYVSIN-RIPIGSLAAYPHWPICEY 354
Query: 214 EP 209
+P
Sbjct: 355 QP 356
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISP 691
PTS AT+ PP P P+ T P P P P P P ++ +A P
Sbjct: 130 PTSPATRAPPPPP--PIAPATGGPPPPP-PIAPATGGPPPPPPIAPAATVP 177
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPP--APADAPVELTTKR 607
P P + T S PT+ A LPP AP +AP E T++
Sbjct: 116 PTTTAPPATTSPPTTTDSPPTTAAETLPPTDAPTEAPTEPPTEK 159
>SB_24633| Best HMM Match : Transposase_8 (HMM E-Value=0.076)
Length = 255
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 282 KIEAIQRV-NDGESKASVARDIGVPESTLRGWCKNEDKLRYM 404
K+E I+ N+G +K R G+P + W K ED + M
Sbjct: 83 KLEVIEWYKNNGLNKNKTCRQFGIPRKCITQWLKMEDVISGM 124
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 452 ASRETCTHRVPGRALTPRASGLDLT--AASIPTSTATQLPPAPADAPVELTTKRSEPSPI 625
A++ +C H + P ASG +T A+ PT++ Q+ + +D P + + P+
Sbjct: 405 ATQTSCGHVTSSASDVPAASGDQVTQSASDFPTASGDQVTQSASDVPTTSDDQVTPPARD 464
Query: 626 PHVPRERRPDPGAS 667
+ + P AS
Sbjct: 465 VPTTSDDQVTPSAS 478
>SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = +2
Query: 509 SGLDLTAASIPTSTATQLPPAPADAPVE-----LTTKRSEPSP 622
SG++L++ S+P + Q P +P ++PV + T +PSP
Sbjct: 428 SGIELSSESLPLTVDLQSPSSPKNSPVHDRNVYVATPPRDPSP 470
>SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 515 LDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAIS 688
LD + I T T L PAD ++ T + SP+P PDP + S +A S
Sbjct: 671 LDERSYEIETDDGTTLRRNPADIRMQQTPSPEDQSPVP-AATVPGPDPSSVSSPAATS 727
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 527 AASIPTSTATQLPPAPADAPVELTTKRSEPSP 622
A + P T T+LPP+P+ + TT +S P
Sbjct: 3135 AITTPQGTTTELPPSPSTVAQDQTTYKSTTFP 3166
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +2
Query: 563 PPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAIS--PLSGLGHIPGLSHSHL 736
PP P+ P+ L +R P P +P E++ + A+ P L G + +
Sbjct: 267 PPTPSSGPM-LKPERPTPVPRKSIPSEQKQKAPKGTDVGAVESLPYIALCTFEGQNAGEI 325
Query: 737 GLSFNEIATISR 772
++ ++ T+ R
Sbjct: 326 SVNEGDLVTVQR 337
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSGLG 706
PT T LPP D P + T + +PIP E P+ ++ PLS G
Sbjct: 115 PTGEGTVLPPQEGDQP-QATDIPEDHAPIPE--NEGVPEQDTDPTLEVAEPLSREG 167
>SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +2
Query: 491 ALTPRASGLDLTAA-SIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGAS 667
AL P+ +G S P + A LP P +L+ + +P P P P P
Sbjct: 130 ALQPQLNGYPSQINFSFPQTAAVTLPQQ-IQHPTQLSQQPQQPDPPPTHKPHSAPPPPVK 188
Query: 668 VSMSAISPLSGLGHIP 715
++P + G P
Sbjct: 189 TPQEIVTPTAHAGKSP 204
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 28.3 bits (60), Expect = 7.7
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +2
Query: 167 DNDCPVKNCKQNTRRLAISEWPLWQQRVSAYARSDARRQNRGHTTGQRRRVQGIGRTRHR 346
+N C V ++ WP+ + + +S R++R H + R R R
Sbjct: 434 ENPCVVTRGDSWVANKRLNPWPVNEDDIRRTKKSTPPRRSR-HPPRRSRHPPRRSRHPPR 492
Query: 347 RARVHSARLVQERGQTALHDVTIIVTRH 430
R+R H R Q R Q DV I+ TRH
Sbjct: 493 RSR-HPPRR-QRRLQGLRGDVDIMSTRH 518
>SB_15993| Best HMM Match : RVT_1 (HMM E-Value=7.2e-12)
Length = 769
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSGLGHIPG 718
P +T T P+PA T R P H P+ RRP+ + G P
Sbjct: 222 PVNTGTIGVPSPAKQRQYEITPRKPNLPQTHTPQSRRPEEPQDIQPPMAPETPGTPPRPS 281
Query: 719 LSHSHLGL 742
S GL
Sbjct: 282 TSTPDKGL 289
>SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6)
Length = 287
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIP 628
PT +L P PA A V+ K S+ PIP
Sbjct: 76 PTPEHAELNPVPAHAQVDPIPKHSQVDPIP 105
>SB_3839| Best HMM Match : Lep_receptor_Ig (HMM E-Value=6)
Length = 286
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 283 LSPGVRARIGAYPLLP*WPLAYCEPACVLFT 191
L PGVR G LLP W L + + + VLFT
Sbjct: 200 LDPGVRQEYGPLHLLPRWTLVFGK-STVLFT 229
>SB_58522| Best HMM Match : Spb1_C (HMM E-Value=4)
Length = 299
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 551 ATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAIS 688
A +L D +E K ++P P P E PDPG A++
Sbjct: 108 ADRLSHTAEDEEIEEFLKSTQPDPNEGNPNENVPDPGEDAFFDALA 153
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 242 QRVSAYARSDARRQNRGHTTGQRRRVQGIGRTRHRRARVHSARL 373
+RVS +R R+ RG +RRR + + R R RRAR RL
Sbjct: 1910 RRVSRRSRRKVVRRKRGR---ERRRRRRMARRRRRRARRRRRRL 1950
>SB_21104| Best HMM Match : SWIM (HMM E-Value=6.5)
Length = 173
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 524 TAASIPTSTATQLPPAPADAPVE--LTTKRSEPSPIPHVPRERRPDPGASVSMSAI 685
T + T T T PP D P++ +T + P+P+ + + +P A+++ S +
Sbjct: 95 TGQELSTGTWTYKPPTTKDIPIDFRVTLLKDAPNPLGVLNSKASGEPPATMACSCL 150
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,597,071
Number of Sequences: 59808
Number of extensions: 578883
Number of successful extensions: 2599
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2570
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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