Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0088
(805 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 36 0.031
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 35 0.073
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 33 0.22
At5g38560.1 68418.m04662 protein kinase family protein contains ... 32 0.39
At3g60320.1 68416.m06742 expressed protein contains Pfam profile... 32 0.51
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 31 0.90
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 0.90
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 1.2
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 30 1.6
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 30 1.6
At1g08170.1 68414.m00902 histone H2B family protein similar to h... 30 1.6
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 30 2.1
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 30 2.1
At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I ... 30 2.1
At4g30860.1 68417.m04381 SET domain-containing protein low simil... 29 2.7
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 29 2.7
At3g11590.1 68416.m01416 expressed protein 29 2.7
At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family... 29 3.6
At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family... 29 3.6
At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family... 29 3.6
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 3.6
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 3.6
At4g08013.1 68417.m01283 hypothetical protein low similarity to ... 29 3.6
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 29 3.6
At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid t... 29 3.6
At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid t... 29 3.6
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 29 4.8
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 29 4.8
At5g13730.1 68418.m01598 RNA polymerase sigma subunit SigD (sigD... 29 4.8
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 4.8
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 29 4.8
At1g45688.1 68414.m05202 expressed protein 29 4.8
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 28 6.3
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 6.3
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 6.3
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 28 6.3
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 6.3
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 6.3
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 28 8.3
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 8.3
At5g18980.1 68418.m02255 expressed protein 28 8.3
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 8.3
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 28 8.3
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 28 8.3
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 28 8.3
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 28 8.3
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 28 8.3
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 8.3
At1g15030.1 68414.m01796 expressed protein 28 8.3
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 464 TCTHRVPGRA---LTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHV 634
+C + P A +TP + L A P+ A+ PP P + P T SP+
Sbjct: 18 SCLAQAPAPAPTTVTPPPTALPPVTAETPSPIAS--PPVPVNEPTPAPTTSPTTSPVASP 75
Query: 635 PRERRPDPGASVSMSAIS 688
P+ P PG S ++ S
Sbjct: 76 PQTDAPAPGPSAGLTPTS 93
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 34.7 bits (76), Expect = 0.073
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSGLGHIPG 718
PT T + P P +P T S PSP P VP + P P VS +P + P
Sbjct: 138 PTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPD 197
Query: 719 LS 724
++
Sbjct: 198 VT 199
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHV-PRERRPDPGASVSMSAISP 691
PT T + P P +P T S PSP P V P P P +SP
Sbjct: 102 PTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSP 153
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVE-----LTTKRSEPSPIPHVPRER 646
P P S A + PT+ + P A A +PVE S P P P VP
Sbjct: 32 PTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVSESSPPPTP-VPESS 90
Query: 647 RPDPGASVSMSAISP 691
P P VS SP
Sbjct: 91 PPVPAPMVSSPVSSP 105
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 524 TAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRER 646
T S P AT P P+ P + +T P+P+P VPRE+
Sbjct: 167 TTTSPPPPPATSASP-PSSNPTDPSTLAPPPTPLPVVPREK 206
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +2
Query: 527 AASIPTSTATQLPPAPADA---PVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISP 691
A + P T PP P DA P TT P P P P E PG + S SP
Sbjct: 103 ATTPPAPPQTVSPPPPPDASPSPPAPTTTNPPPKPSPSPPGETPSPPGETPSPPKPSP 160
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 533 SIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVS 673
S P T T PP P+ +P T +P P P P P + S
Sbjct: 124 SPPAPTTTNPPPKPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTS 170
>At3g60320.1 68416.m06742 expressed protein contains Pfam profiles:
PF04782: protein of unknown function (DUF632), PF04783:
protein of unknown function (DUF630)
Length = 796
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +2
Query: 476 RVPGRALTPRASGLDLTAASIPTSTATQLPPAPAD--APVELTTKRSEPSPIPH--VPRE 643
R+ G AL+ ASG L+ + + PP P +P + R PSP P P
Sbjct: 46 RITGSALSSFASGEPLSVSDQTPAVFLHTPPPPLSEQSPAKFVPPRFSPSPAPSSVYPPS 105
Query: 644 RRPDPGASVSMSAISPLS 697
P +S S +S S
Sbjct: 106 TSPSVASSKQPSVMSTSS 123
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPG 661
P T LPP P PV + S P P P P P PG
Sbjct: 326 PIPTIPTLPPLPVLPPVPIVNPPSLPPPPPSFPVPLPPVPG 366
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 506 ASGLDLTAASIPTSTATQLPPAPADAPVEL-TTKRSEPSPIPHVPRERRPDPGASVSMSA 682
A G + P T +P P P + TT +PSP+P P ++P P + +
Sbjct: 413 AGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTP-VQKPSPVPTTPVHE 471
Query: 683 ISPL 694
SP+
Sbjct: 472 PSPV 475
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIP 628
P +A TP + + S + + L P A PV+ +T SEP+ +P
Sbjct: 655 PTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVP 703
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2
Query: 512 GLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISP 691
G++ S T+ AT+LP PA +P S PSP P P P P +S A +P
Sbjct: 1102 GIEAKEDSPATTCATELPSFPAGSPP--LPHESPPSPPPQPPSS--PPPPSSPPQLAPAP 1157
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPG 661
P +TP + + +P ++ +P P+ +P LT P+P E P PG
Sbjct: 70 PPMPMTPPP--MPMAPPPMPMASPPMMPMTPSTSPSPLTVPDMPSPPMPS-GMESSPSPG 126
Query: 662 ASVSMSAISPLSG 700
A SP SG
Sbjct: 127 PMPPAMAASPDSG 139
>At1g08170.1 68414.m00902 histone H2B family protein similar to
histone H2B from Chlamydomonas reinhardtii [SP|P54347,
SP|P54346, SP|P50565], Volvox carteri [SP|P16867,
SP|P16868]; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 243
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 512 GLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIP 628
G ++T IP + P P + PVE+ R EPSP P
Sbjct: 75 GENVTTVKIPVDDRDESSPQPPETPVEV---RDEPSPQP 110
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHV---PRERRP 652
P A TP + A P +T + P+PAD P P+ P P + P
Sbjct: 49 PPPAATPAPATPPPAATPAPATTPPSVAPSPADVPTASPPAPEGPTVSPSSAPGPSDASP 108
Query: 653 DPGASVSMSA 682
P A+ S A
Sbjct: 109 APSAAFSNKA 118
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRS-EPSPIPHVPRERRPDP 658
P A P + A P +T P PA P TT S PSP VP P P
Sbjct: 32 PPPATPPPVATPPPVATPPPAATPAPATPPPAATPAPATTPPSVAPSP-ADVPTASPPAP 90
Query: 659 -GASVSMSAISPLSGLGHIPGLSHSH 733
G +VS S+ S P + S+
Sbjct: 91 EGPTVSPSSAPGPSDASPAPSAAFSN 116
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 500 PRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPI-PHVPRERRPDPGASV-- 670
P+AS +PT TQ P AP + K +P P+ P+ E P + +
Sbjct: 336 PKASVATKEVKPVPTKPVTQEPTAPKEDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPN 395
Query: 671 SMSAISP 691
S +++SP
Sbjct: 396 STTSVSP 402
>At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I
GI:3399767 from [Arabidopsis thaliana]; contains Pfam
profile PF02298: Plastocyanin-like domain; identical to
cDNA uclacyanin I GI:3399766
Length = 261
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 506 ASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPI-PHVPRERRPDPGASVSMSA 682
+ G+ L +PT+T P P P S PI P +P P P S S S
Sbjct: 112 SQGMKLEVNVVPTATVAPTAPLPNTVPSLNAPSPSSVLPIQPLLP--LNPVPVLSPSSST 169
Query: 683 ISPLSGLGHIPGLS 724
P S L IP LS
Sbjct: 170 PLPSSSLPLIPPLS 183
>At4g30860.1 68417.m04381 SET domain-containing protein low
similarity to IL-5 promoter REII-region-binding protein
[Homo sapiens] GI:12642795; contains Pfam profile
PF00856: SET domain
Length = 497
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 492 ARPGTRCVHVSLEARRHCSCPCRVTIIVTSCSAVCPRSCTSR 367
A G C + R SC CRV I S CP SC +R
Sbjct: 281 ANDGVGCTNCGPNCDR--SCVCRVQCISCSKGCSCPESCGNR 320
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 566 PAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSGLGHIPGLSHSHLGLS 745
P P+ P + + + +P P P VP P P +P S G+ P + LG+
Sbjct: 38 PVPSPKPKPVPSPKPKPVPSPSVPSPSVPSPNPRPVTPPRTPGSS-GNCP-IDALRLGVC 95
Query: 746 FNEIATISRFGATQPGCR 799
N ++++ QP +
Sbjct: 96 ANVLSSLLNIQLGQPSAQ 113
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +2
Query: 470 THRVPGRALTPRASGLDLTAASIPTS-----TATQLPPAPADA-PVELTTKRSEPSPIPH 631
T R+ GR+ +PRASG L AA+ P+S T PAP A + T P P
Sbjct: 57 TWRLMGRSPSPRASGA-LHAAASPSSHCGSKTGKVSAPAPVSARKLAATLWEMNEMPSPR 115
Query: 632 VPRERRP 652
V E P
Sbjct: 116 VVEEAAP 122
>At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +2
Query: 461 ETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSP-IP-HV 634
+ +H P T A L + S+P ++ L P+P P+ SE SP +P
Sbjct: 122 DASSHSSPAPVPTVEAKALSEVSPSVPADASSHLSPSP--VPIVEAKALSEVSPSVPADT 179
Query: 635 PRERRPDPGASVSMSAISPLSGLGHIPGLSHSH 733
P P V A+S +S +P + SH
Sbjct: 180 SSHFSPAPVPIVEAEALSVVS--PSVPADTSSH 210
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 461 ETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSP 622
+T +H P A L + + S+P T++ PAP P+ SE SP
Sbjct: 178 DTSSHFSPAPVPIVEAEALSVVSPSVPADTSSHFSPAP--VPIVEAKTLSEVSP 229
>At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +2
Query: 461 ETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSP-IP-HV 634
+ +H P T A L + S+P ++ L P+P P+ SE SP +P
Sbjct: 122 DASSHSSPAPVPTVEAKALSEVSPSVPADASSHLSPSP--VPIVEAKALSEVSPSVPADT 179
Query: 635 PRERRPDPGASVSMSAISPLSGLGHIPGLSHSH 733
P P V A+S +S +P + SH
Sbjct: 180 SSHFSPAPVPIVEAEALSVVS--PSVPADTSSH 210
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 461 ETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSP 622
+T +H P A L + + S+P T++ PAP P+ SE SP
Sbjct: 178 DTSSHFSPAPVPIVEAEALSVVSPSVPADTSSHFSPAP--VPIVEAKTLSEVSP 229
>At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +2
Query: 461 ETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSP-IP-HV 634
+ +H P T A L + S+P ++ L P+P P+ SE SP +P
Sbjct: 122 DASSHSSPAPVPTVEAKALSEVSPSVPADASSHLSPSP--VPIVEAKALSEVSPSVPADT 179
Query: 635 PRERRPDPGASVSMSAISPLSGLGHIPGLSHSH 733
P P V A+S +S +P + SH
Sbjct: 180 SSHFSPAPVPIVEAEALSVVS--PSVPADTSSH 210
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 461 ETCTHRVPGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSP 622
+T +H P A L + + S+P T++ PAP P+ SE SP
Sbjct: 178 DTSSHFSPAPVPIVEAEALSVVSPSVPADTSSHFSPAP--VPIVEAKTLSEVSP 229
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 527 AASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSG 700
A +P+S PP PA P + +P P P P+ RP P S+ A P SG
Sbjct: 376 APQMPSSAGPPRPPPPAPPP---GSGGPKPPP-PPGPKGPRPPPPMSLGPKAPRPPSG 429
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 527 AASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSG 700
A +P+S PP PA P + +P P P P+ RP P S+ A P SG
Sbjct: 376 APQMPSSAGPPRPPPPAPPP---GSGGPKPPP-PPGPKGPRPPPPMSLGPKAPRPPSG 429
>At4g08013.1 68417.m01283 hypothetical protein low similarity to
SCARECROW [Zea mays] GI:10178637
Length = 113
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +2
Query: 494 LTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVS 673
+T RA G T P S Q PA AP TT+R +P P + P P A ++
Sbjct: 18 VTQRAGGS--TPLGRPASLPQQYDFTPAAAPQSSTTQRVDPPPPRSEEAQFNPPPEAPLN 75
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 536 IPTSTATQLPPAPADAPVELTTKRSEPSPIPHV-PRE-RRPDPGASVSMSAISPLSGL 703
IP+ PP P +P+ TT +PS +P + P + + P P + + S SP L
Sbjct: 302 IPSPATITAPPPPFSSPLSQTTPSPKPS-LPQIEPNQIKSPSPKLTNTESHASPEQNL 358
>At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 536 IPTSTATQLPPAPADAPVELTTKRSEPS-PIPHVPRERRPDPGASVSMSAISPLSGL 703
+P T +LP P P + P P+P V + P P +V + P+SGL
Sbjct: 98 VPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPLPPISGL 154
>At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 536 IPTSTATQLPPAPADAPVELTTKRSEPS-PIPHVPRERRPDPGASVSMSAISPLSGL 703
+P T +LP P P + P P+P V + P P +V + P+SGL
Sbjct: 98 VPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPLPPISGL 154
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 28.7 bits (61), Expect = 4.8
Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = +2
Query: 521 LTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSG 700
L A P+ T T PP A P T P+P P P P +S SA SP S
Sbjct: 20 LAQAPAPSPTTTVTPPPVATPPPAAT-----PAPTTTPPPAVSPAPTSSPPSSAPSPSSD 74
Query: 701 LGHIPGLSHSHLGLSFNEIA-TISRFGATQPGCRL 802
+ G+S E+A T S A P L
Sbjct: 75 APTASPPAPEGPGVSPGELAPTPSDASAPPPNAAL 109
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 563 PPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSGLGHIPG 718
PPAPA AP S P P P V + + G + +P SG PG
Sbjct: 63 PPAPAPAPPSKNIPTSIPIPTPAVTGQAKSKGGGKANPGHKNP-SGRHSKPG 113
>At5g13730.1 68418.m01598 RNA polymerase sigma subunit SigD (sigD) /
sigma-like factor (SIG4) identical to RNA polymerase
sigma subunit SigD [Arabidopsis thaliana] GI:4972296,
sigma-like factor [Arabidopsis thaliana] GI:3983260;
contains Pfam profiles PF04545: Sigma-70, region 4,
PF04539: Sigma-70 region 3, PF04542: Sigma-70 region 2
Length = 419
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +2
Query: 527 AASIPTS-TATQ--LPPAPADAPVELTTKRSEPSP 622
A +IPT+ TAT PP P +P+ TT + +PSP
Sbjct: 2 ATTIPTTATATMCPSPPVPTISPLLRTTHQCQPSP 36
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 533 SIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISP 691
S PT++ T PP A +P TT S P P P P P + + S P
Sbjct: 17 SPPTNSTTTTPPPAASSPPPTTTP-SSPPPSPST-NSTSPPPSSPLPPSLPPP 67
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 494 LTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVS 673
+T +S L +++S P+ + + +P+ AP + S P P+ P P P +S
Sbjct: 20 ITTSSSSLSPSSSS-PSLSPSPPSSSPSSAPPS-SLSPSSPPPLSLSPSSPPPPPPSSSP 77
Query: 674 MSAISP 691
+S++SP
Sbjct: 78 LSSLSP 83
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPG 661
P P S L++ S P+ + + +P+ AP + S P P+ P P P
Sbjct: 65 PSSPPPPPPSSSPLSSLS-PSLSPSPPSSSPSSAPPS-SLSPSSPPPLSLSPSSPPPPPP 122
Query: 662 ASVSMSAISPLS 697
+S +S++SP S
Sbjct: 123 SSSPLSSLSPSS 134
>At1g45688.1 68414.m05202 expressed protein
Length = 342
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 545 STATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDP 658
S +T LPPAP + K+ P PIP P P P
Sbjct: 253 SGSTLLPPAPPAPLPKPKKKKGAPVPIPDPPAPPAPVP 290
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 521 LTAASIPTSTATQLP-PAPADAPVELTTKRSEPS-PIPHVPRERRPDPGASVSMSAISPL 694
L A I +S Q P PAP +P+ + + P P + P P A+ + + +SP
Sbjct: 10 LFLALIASSAIAQAPGPAPTRSPLPSPAQPPRTAAPTPSITPTPTPTPSATPTAAPVSPP 69
Query: 695 SG 700
+G
Sbjct: 70 AG 71
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPAD-APVELTTKRSEPSPIPHVPRERRPDP 658
P A P A+ PTS P P+ A V T PSP VPR P P
Sbjct: 87 PYSASPPPRPASPRVASPRPTSPRVASPRVPSPRAEVPRTLSPKPPSPRAEVPRSLSPKP 146
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = +2
Query: 488 RALTPRASGLDLTAASIPTSTATQLPPA--PAD--APVELTTKRSEPSPIPHVPRERRP 652
RA PR+ S P+S + PP PA P + T S PSP P PR P
Sbjct: 150 RADLPRSLSPKPFDRSKPSSASANAPPTLRPASTRVPSQRITPHSVPSPRPSSPRGASP 208
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPAD-APVELTTKRSEPSPIPHVPRERRPDP 658
P A P A+ PTS P P+ A V T PSP VPR P P
Sbjct: 86 PYSASPPPRPASPRVASPRPTSPRVASPRVPSPRAEVPRTLSPKPPSPRAEVPRSLSPKP 145
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = +2
Query: 488 RALTPRASGLDLTAASIPTSTATQLPPA--PAD--APVELTTKRSEPSPIPHVPRERRP 652
RA PR+ S P+S + PP PA P + T S PSP P PR P
Sbjct: 149 RADLPRSLSPKPFDRSKPSSASANAPPTLRPASTRVPSQRITPHSVPSPRPSSPRGASP 207
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADA---PVELTTKRSEPSPIPHVPRERRP 652
PGR+ +P A D T A +P+ + Q P+P A P + PSP P +R P
Sbjct: 424 PGRSPSPVARLRDPTGARLPSPSIEQRLPSPPVAQRLPSPPPRRAGLPSP---PPAQRLP 480
Query: 653 DP 658
P
Sbjct: 481 SP 482
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 530 ASIPTSTATQL--PPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLS 697
AS PT + + PPAP P + P+ P P P P + + A SP+S
Sbjct: 106 ASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPPPVQAPSPIS 163
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 482 PGRALTPRASGLDLTAASIPTSTATQLPPAPADAPVELTTKRSEPSPIP 628
PG + P A S P + PPAP+ +P + +P P+P
Sbjct: 16 PGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVP 64
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASV 670
P T PP P AP T +P P P +P PG V
Sbjct: 97 PKPTPAPTPPKPKPAPAPAPTPAPKPKPAP------KPAPGGEV 134
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISPLSGLGHIPG 718
P S+ + P + +P+ T S H P P P S S + SP H P
Sbjct: 172 PRSSVSPAQPPKSSSPISHTPALSPSHATSHSPATPSPSP-KSPSPVSHSPSHSPAHTPS 230
Query: 719 LSHSH 733
S +H
Sbjct: 231 HSPAH 235
>At5g18980.1 68418.m02255 expressed protein
Length = 835
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Frame = +3
Query: 294 IQRVNDG----ESKASVARDIGVPESTLRGWCKNED 389
++R++D S+ + ARD VPE+TL W KN D
Sbjct: 169 LKRISDSIFKPRSREATARDCVVPETTLETW-KNSD 203
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 566 PAPADAPVELTTKRSEPSPIPHVPRERRPDP 658
P P P L +R+ P P P + R R P P
Sbjct: 28 PLPPPPPPPLMRRRAPPPPPPPLMRRRAPPP 58
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 527 AASIPTSTATQLPPAPADAPVELTTKRSEPSP-IPHVPRERRPDPGA-SVSMSAISPLSG 700
+AS PT T P PA PV T + +PSP + +P R P P + S A P G
Sbjct: 50 SASQPTRPFTASGPPPAP-PVG-TMRPGQPSPFVSQIPGSRPPPPSSNSFPSPAYGPPGG 107
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = +2
Query: 479 VPGRALTPRASGLDLTAASIPTSTATQLPP--APADAPVELTTKRSEPSPIPH-VPRERR 649
+P P S + S P + A PP AP P + + +PIP VP
Sbjct: 97 IPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATIS 156
Query: 650 PDPGASVSMSAISPLSGLGHIPGLSHSHLGLSFNEIATISR 772
A S +P+ G + G + S+L N +TI +
Sbjct: 157 SSTPAPDS----APVGSQGDVYGQAASNLAAGSNLESTIQQ 193
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = +2
Query: 479 VPGRALTPRASGLDLTAASIPTSTATQLPP--APADAPVELTTKRSEPSPIPH-VPRERR 649
+P P S + S P + A PP AP P + + +PIP VP
Sbjct: 97 IPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATIS 156
Query: 650 PDPGASVSMSAISPLSGLGHIPGLSHSHLGLSFNEIATISR 772
A S +P+ G + G + S+L N +TI +
Sbjct: 157 SSTPAPDS----APVGSQGDVYGQAASNLAAGSNLESTIQQ 193
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 539 PTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDP 658
P Q P P P + K+S P+P P P ++ P
Sbjct: 227 PPPQVKQSEPTPPPPPPSIAVKQSAPTPSPPPPIKKGSSP 266
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +2
Query: 524 TAASIPTSTATQLPPAPADAPVELTTKRSEPSPIPHVPRERRPDPGASVSMSAISP 691
T A+ T+T PP P P E S P P P P P+P S+ P
Sbjct: 133 TTAAAGTTTIAGQPPPPESPPPE-----SLPPPSPESPSPPSPEPPPPSSLEPPPP 183
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 521 LTAASIPTSTATQLPPAPADAPVELTTKRSEPSP-IPHVPRERRPDPGASVSMSAISP 691
L + SIP A PP P P + RS PSP P P P G++ + P
Sbjct: 582 LPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQP 639
>At1g15030.1 68414.m01796 expressed protein
Length = 360
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 291 AIQRVNDGESKASVARDI---GVPESTLRGWCKNEDKLRYMTSRLS----SPDTDKSNDG 449
++Q GE S RD G + RG C +++++ +LS + S+DG
Sbjct: 138 SLQARRQGEESESDFRDSSSEGSSSESERGLCYSKEQISARMDKLSLRKEHQEDSSSDDG 197
Query: 450 EPLEKRARTV 479
EPL + R +
Sbjct: 198 EPLSSQGRLI 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,682
Number of Sequences: 28952
Number of extensions: 346692
Number of successful extensions: 1531
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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