Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0087
         (671 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3...    29   0.61 
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo...    25   7.5  
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G...    25   9.9  
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo...    25   9.9  

>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 555

 Score = 29.1 bits (62), Expect = 0.61
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -1

Query: 287 QIKNTRTRHQSHTDTESKHEFNESIINYQVK---KKKCLTLYLHQ 162
           Q++NT     + +D  S   FNESI+N  +K   +KK L L+  Q
Sbjct: 340 QVRNTINEKYNVSDNTSWDRFNESILNPNIKGAGEKKQLGLFYPQ 384


>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
           Wis4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1401

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 263 HQSHTDTESKHEFNESI 213
           H S  DTES ++F+ESI
Sbjct: 192 HHSEEDTESDNDFSESI 208


>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
           Gde1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1076

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 464 KNNVDKAICYL*AKLGYAGFASKF 535
           +N+  +++ +  AKLG+AG  SKF
Sbjct: 251 RNSKGQSVMHSVAKLGWAGLCSKF 274


>SPAC637.12c |mst1||histone acetyltransferase
           Mst1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 463

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 470 YFCAFCFCL*GS 435
           Y C+FCFC  GS
Sbjct: 213 YICSFCFCYYGS 224


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,525,720
Number of Sequences: 5004
Number of extensions: 47954
Number of successful extensions: 122
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)