Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0087
         (671 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1026 - 8124929-8125120,8125294-8125344,8125610-8125743,812...    32   0.48 
08_02_1203 + 25262875-25263492,25264761-25264813,25265308-252653...    29   3.4  
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369...    29   3.4  
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855...    29   3.4  

>01_01_1026 -
           8124929-8125120,8125294-8125344,8125610-8125743,
           8125842-8126096,8126175-8126513,8126607-8126748,
           8127068-8127199
          Length = 414

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 626 VHM-RPSAQKWPILHFFIFVVLPNCNLFKT**ILMQNRH 513
           +HM +P    W    FF   +LPNC L +T  +L+Q+ H
Sbjct: 6   IHMIQPVPIDWGQCTFFFHAILPNCLLIETPVLLLQHSH 44


>08_02_1203 +
           25262875-25263492,25264761-25264813,25265308-25265373,
           25265581-25265695,25265860-25265970
          Length = 320

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 270 PCIFYLLCKLMYISC 314
           PC F+L+CK+ ++SC
Sbjct: 219 PCYFFLICKIYWLSC 233


>06_01_0511 +
           3688788-3688880,3689050-3689166,3689959-3690066,
           3690634-3690825,3691010-3691201,3691484-3691602,
           3691740-3691827,3692155-3692274,3692378-3692518,
           3693065-3693142
          Length = 415

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -1

Query: 245 TESKHE-FNESIINYQVKKKKCLTLY 171
           TE  HE FNE II  Q KKK  L  Y
Sbjct: 389 TEVTHEDFNEGIIQVQAKKKSSLNYY 414


>02_05_1126 -
           34284733-34284810,34285151-34285291,34285424-34285543,
           34285787-34285874,34285962-34286080,34286437-34286628,
           34286802-34286993,34287309-34287416,34287983-34288099,
           34288214-34288315
          Length = 418

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -1

Query: 245 TESKHE-FNESIINYQVKKKKCLTLY 171
           TE  HE FNE II  Q KKK  L  Y
Sbjct: 392 TEVTHEDFNEGIIQVQAKKKSSLNYY 417


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,537,756
Number of Sequences: 37544
Number of extensions: 247285
Number of successful extensions: 415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)