Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0087
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003437-1|AAO39440.1| 1235|Drosophila melanogaster SD03652p pro...    30   3.3  
AY274835-1|AAP31582.1| 1235|Drosophila melanogaster rigor mortis...    30   3.3  
AE013599-3048|AAF57440.3| 1235|Drosophila melanogaster CG30149-P...    30   3.3  

>BT003437-1|AAO39440.1| 1235|Drosophila melanogaster SD03652p
           protein.
          Length = 1235

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 671 NKIYTSGNDSHNTYMVHMRPSAQKWPILHFF 579
           NK   SGND  + Y++  +P+ + W  LH F
Sbjct: 755 NKFAVSGNDK-SVYVMEFQPTERNWKTLHTF 784


>AY274835-1|AAP31582.1| 1235|Drosophila melanogaster rigor mortis
           protein.
          Length = 1235

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 671 NKIYTSGNDSHNTYMVHMRPSAQKWPILHFF 579
           NK   SGND  + Y++  +P+ + W  LH F
Sbjct: 755 NKFAVSGND-RSVYVMEFQPTERNWKTLHTF 784


>AE013599-3048|AAF57440.3| 1235|Drosophila melanogaster CG30149-PB
           protein.
          Length = 1235

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 671 NKIYTSGNDSHNTYMVHMRPSAQKWPILHFF 579
           NK   SGND  + Y++  +P+ + W  LH F
Sbjct: 755 NKFAVSGND-RSVYVMEFQPTERNWKTLHTF 784


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,652,420
Number of Sequences: 53049
Number of extensions: 463642
Number of successful extensions: 821
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)