Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0087
         (671 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U00043-6|AAC77507.1|  487|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z83744-4|CAB06040.4|  735|Caenorhabditis elegans Hypothetical
           protein C06A12.4 protein.
          Length = 735

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 232 CFDSVSVCDWCRVRVFFICYVN*CTY 309
           CF  V+ C WC   +FF C +N   Y
Sbjct: 75  CFTIVAWCGWCSNYIFFPCLMNAILY 100


>U00043-6|AAC77507.1|  487|Caenorhabditis elegans Hypothetical
           protein T26A5.4 protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -2

Query: 319 DIHDMYINLHSK*KI-HGRDTNHTRTPNQNTNSMNRL*ITK 200
           +IHD+Y+ L  K +I  G+D + T   ++++N + +L  T+
Sbjct: 223 EIHDLYLRLSQKERILQGKDEDSTILTHKSSNGVVQLLTTR 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,809,027
Number of Sequences: 27780
Number of extensions: 262046
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)