Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0086
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32) 40 0.002
SB_1732| Best HMM Match : GETHR (HMM E-Value=1.7e-06) 39 0.004
SB_29777| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_38071| Best HMM Match : ABC_membrane (HMM E-Value=1.2e-11) 35 0.082
SB_51287| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53) 33 0.25
SB_42354| Best HMM Match : GETHR (HMM E-Value=5.3) 32 0.44
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_35| Best HMM Match : zf-U1 (HMM E-Value=0.12) 30 1.8
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 29 3.1
SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 29 4.1
SB_8153| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51223| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 29 4.1
SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32)
Length = 429
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 317 EHKPSKPAKIKTLPSNASTMHPCMLLAYMKPAQEYRELAVDGDKPQNMMFTIGLVVDGKT 496
E + AK + SNA+ P M L KP E+R ++ +G P + F + + V+G+T
Sbjct: 38 EKTKRRSAKKRKTSSNATFKTPLMQLNEYKPGLEFRLVSQEG-PPHDTTFVVAVTVNGQT 96
Query: 497 YVGK 508
Y GK
Sbjct: 97 YEGK 100
>SB_1732| Best HMM Match : GETHR (HMM E-Value=1.7e-06)
Length = 154
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
+T D +RH TR D RH+ATR D +RH+ T T
Sbjct: 56 KTRLDKTRHDETRLDKTRHDATRLDKTRHDETRLDKT 92
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
+T D +RH TR D RH+ TR D +RH+ T T
Sbjct: 36 KTQLDKARHDKTRLDKTRHDKTRLDKTRHDETRLDKT 72
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
+T D +RH TR D RH+ TR D +RH+ T T
Sbjct: 46 KTRLDKTRHDKTRLDKTRHDETRLDKTRHDATRLDKT 82
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
T D +RH TR D RH+ TR D +RH+ T T
Sbjct: 67 TRLDKTRHDATRLDKTRHDETRLDKTRHDETRLDKT 102
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
T D +RH TR D RH+ TR D +RH+ T T
Sbjct: 77 TRLDKTRHDETRLDKTRHDETRLDKTRHDETRLDKT 112
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
T D +RH TR D RH+ TR D +RH+ T T
Sbjct: 87 TRLDKTRHDETRLDKTRHDETRLDKTRHDETRLDKT 122
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPT 691
+T D +RH TR D RH+ R D +RH+ T
Sbjct: 6 KTRLDKTRHNETRLDKTRHDKARLDKTRHDKT 37
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 608 DTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
D +RH T+ D RH+ TR D +RH+ T T
Sbjct: 30 DKTRHDKTQLDKARHDKTRLDKTRHDKTRLDKT 62
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
+T D +RH TR + RH+ TR D +RH+
Sbjct: 121 KTRLDKTRHDETRLNKTRHDETRLDKTRHD 150
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
T D +RH R D RH+ T+ D +RH+ T T
Sbjct: 17 TRLDKTRHDKARLDKTRHDKTQLDKARHDKTRLDKT 52
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHEPT 691
T D +RH TR D RH+ TR D +R + T
Sbjct: 97 TRLDKTRHDETRLDKTRHDETRLDKTRLDKT 127
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
+T D +R TR D RH+ TR + +RH+ T T
Sbjct: 111 KTRHDETRLDKTRLDKTRHDETRLNKTRHDETRLDKT 147
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 583 DRHSENTPRH*PTPADASRHRPTRGYTSRREPTRADTGRFHDGRALN 723
D+ + RH T D +RH TR +R + TR D R HD L+
Sbjct: 35 DKTQLDKARHDKTRLDKTRHDKTRLDKTRHDETRLDKTR-HDATRLD 80
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 620 HRPTRADTGRHEATRADASRHE 685
H TR D RH TR D +RH+
Sbjct: 4 HGKTRLDKTRHNETRLDKTRHD 25
>SB_29777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 593 ARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
++T DT+RH R DT RH + D +RH T +T
Sbjct: 114 SKTQHDTARHSTARHDTARHNMAQQDTARHSTTQHSTT 151
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 584 TDTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*T 724
T + T DT+ H T+ DT RH R D +RH A TA H T
Sbjct: 101 TQHSTTQHDTTWHSKTQHDTARHSTARHDTARH--NMAQQDTARHST 145
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +2
Query: 587 DTAR---THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST---TAEH*T 724
DTAR DT+RH + DT RH T+ ++H T +T TA H T
Sbjct: 119 DTARHSTARHDTARHNMAQQDTARHSTTQHSTTQHSTTRHSTTQHGTARHST 170
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHE 685
DTA+ RDT+RH R T RH R D ++H+
Sbjct: 44 DTAQ--RDTARHSTARHSTARHSTARHDTAQHD 74
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +2
Query: 587 DTAR---THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST---TAEH*T 724
DTAR T+RH R DT +H+ D +RH T +T T +H T
Sbjct: 49 DTARHSTARHSTARHSTARHDTAQHDTELRDTARHSTTQYSTTQHSTTQHST 100
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 584 TDTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*T 724
T + T T+RH T+ T RH T+ D ++H+ A T +H T
Sbjct: 146 TQHSTTQHSTTRHSTTQHGTARHSTTQHDTAQHD--TAQHDTTQHDT 190
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 597 EHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHS 728
+H+ T T + T DT H T+ DT+RH R + +H+
Sbjct: 92 QHSTTQHSTTQHSTTQHDTTWHSKTQHDTARH-STARHDTARHN 134
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*T 724
DTAR T++H T+ T RH T+ +RH T TA+H T
Sbjct: 139 DTAR--HSTTQHSTTQHSTTRHSTTQHGTARHSTTQ--HDTAQHDT 180
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 605 RDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
RDT+RH T+ T +H T+ ++H T +T
Sbjct: 78 RDTARHSTTQYSTTQHSTTQHSTTQHSTTQHDTT 111
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHE 685
DTA+ DT++H T+ DT H T+ D +RH+
Sbjct: 174 DTAQ--HDTAQHDTTQHDTTWHSKTQHDTARHD 204
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 590 TARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST---TAEH*T 724
TAR DT++H DT RH T+ ++H T +T T +H T
Sbjct: 65 TAR--HDTAQHDTELRDTARHSTTQYSTTQHSTTQHSTTQHSTTQHDT 110
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 584 TDTARTHRDTSRHRPTRADTGRHEATRADASRHE 685
T + RDT++ R T RH R +RH+
Sbjct: 36 TQDSTAQRDTAQRDTARHSTARHSTARHSTARHD 69
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R+ +TSRH + +T RHE +R + SRHE
Sbjct: 36 RSRHETSRHESSPHETSRHETSRHETSRHE 65
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHEPTP 694
+T+R R SRH R T RHE +R + SRHE +P
Sbjct: 15 ETSRHER--SRHESNRHKTSRHERSRHETSRHESSP 48
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 579 RRQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKH 725
R +T R H + +T R E +P +T HE +R +TSRH R ++ +H
Sbjct: 28 RHKTSR-HERSRHETSRHESSPHETSRHETSRHETSRHER-SRHETRQH 74
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*TL 727
R+ +T +H +R T RHE +R + SRHE + T +H TL
Sbjct: 111 RSRHETRQHERSRHKTSRHEKSRHETSRHE--RSRHETRQHETL 152
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 583 DRHSENTPRH*PTPADASRHRPTRGYTSRREPTRADTGRFHD 708
+R T RH +P + SRH +R TSR E +R +T R H+
Sbjct: 35 ERSRHETSRHESSPHETSRHETSRHETSRHERSRHET-RQHE 75
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 608 DTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAE 715
+TSRH +R ++ RH+ +R + SRHE + S+ E
Sbjct: 15 ETSRHERSRHESNRHKTSRHERSRHETSRHESSPHE 50
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 611 TSRHRPTRADTGRHEATRADASRHE 685
TSRH +R T RHE +R + SRHE
Sbjct: 91 TSRHGRSRHKTSRHETSRHERSRHE 115
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 582 RQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKH 725
R + H + +T R E + +TR HE +R TSRH R ++++H
Sbjct: 93 RHGRSRHKTSRHETSRHERSRHETRQHERSRHKTSRHEK-SRHETSRH 139
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ +TSRH+ + +T RHE +R +++RH+
Sbjct: 2 SRNETSRHKTKQHETSRHERSRHESNRHK 30
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ +TSRH +R +T +HE +R SRHE
Sbjct: 57 SRHETSRHERSRHETRQHERSRHKTSRHE 85
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ +TSRH +R +T +HE +R SRHE
Sbjct: 102 SRHETSRHERSRHETRQHERSRHKTSRHE 130
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R+ +++RH+ +R + RHE +R ++S HE
Sbjct: 21 RSRHESNRHKTSRHERSRHETSRHESSPHE 50
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R+ TSRH +R T RH +R SRHE
Sbjct: 76 RSRHKTSRHESSRHKTSRHGRSRHKTSRHE 105
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 585 QTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKH 725
+T R H + +T R E + +TR HE +R TSRH R ++++H
Sbjct: 50 ETSR-HETSRHETSRHERSRHETRQHERSRHKTSRHES-SRHKTSRH 94
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRH 682
R+ +T +H +R T RHE++R SRH
Sbjct: 66 RSRHETRQHERSRHKTSRHESSRHKTSRH 94
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ ++SRH+ +R RH+ +R + SRHE
Sbjct: 82 SRHESSRHKTSRHGRSRHKTSRHETSRHE 110
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R+ TSRH +R + RHE + + SRH+
Sbjct: 96 RSRHKTSRHETSRHERSRHETRQHERSRHK 125
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 582 RQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQS 716
R ++H + + R E T HE +R +TSRH P S
Sbjct: 8 RHKTKQHETSRHERSRHESNRHKTSRHERSRHETSRHESSPHETS 52
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ +TSRH +R + RHE + + SRH+
Sbjct: 52 SRHETSRHETSRHERSRHETRQHERSRHK 80
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 582 RQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKH 725
R + H + T R E + +T HE + +TSRH R ++++H
Sbjct: 18 RHERSRHESNRHKTSRHERSRHETSRHESSPHETSRHE-TSRHETSRH 64
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 586 RHSEN---TPRH*PTPADASRHRPTRGYTSRREPTRADTGRFHDGR 714
RH N T RH + + SRH + TSR E +R +T R R
Sbjct: 23 RHESNRHKTSRHERSRHETSRHESSPHETSRHETSRHETSRHERSR 68
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R H + SRH+ +R ++ RH+ +R SRH+
Sbjct: 72 RQH-ERSRHKTSRHESSRHKTSRHGRSRHK 100
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAG 700
+T+R R SRH + + RH+ +R ++SRH+ + G
Sbjct: 60 ETSRHER--SRHETRQHERSRHKTSRHESSRHKTSRHG 95
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R+ TSRH +R T RHE +R SRHE
Sbjct: 36 RSRHKTSRHESSRHKTSRHERSRHKTSRHE 65
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R H + SRH+ +R +T RHE +R + SRHE
Sbjct: 77 RQH-ERSRHKTSRHETSRHEKSRHERSRHE 105
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 611 TSRHRPTRADTGRHEATRADASRHE 685
TSRH +R T RHE +R + SRHE
Sbjct: 51 TSRHERSRHKTSRHETSRHERSRHE 75
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*TL 727
R+ +T +H +R T RHE +R + SRHE + T +H TL
Sbjct: 71 RSRHETRQHERSRHKTSRHETSRHEKSRHE--RSRHETRQHETL 112
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 582 RQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKH 725
R + H + +T R E + +TR HE +R TSRH R + ++H
Sbjct: 53 RHERSRHKTSRHETSRHERSRHETRQHERSRHKTSRHE-TSRHEKSRH 99
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R+ +T +H +R T RHE++R SRHE
Sbjct: 26 RSRHETRQHERSRHKTSRHESSRHKTSRHE 55
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ +TSRH +R +T +HE +R SRHE
Sbjct: 17 SRHETSRHERSRHETRQHERSRHKTSRHE 45
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ +TSRH +R +T +HE +R SRHE
Sbjct: 62 SRHETSRHERSRHETRQHERSRHKTSRHE 90
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ ++SRH+ +R + RH+ +R + SRHE
Sbjct: 42 SRHESSRHKTSRHERSRHKTSRHETSRHE 70
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 600 HTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKH 725
H + +T R E + +TR HE +R TSRH R ++++H
Sbjct: 14 HETSRHETSRHERSRHETRQHERSRHKTSRHES-SRHKTSRH 54
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHE 685
+ + SRH+ +R +T RHE +R + +HE
Sbjct: 52 SRHERSRHKTSRHETSRHERSRHETRQHE 80
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 582 RQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKH 725
R R+H + T R E + T HE +R TSRH R + ++H
Sbjct: 28 RHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHE-TSRHERSRH 74
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHE 685
R H + SRH+ +R ++ RH+ +R + SRH+
Sbjct: 32 RQH-ERSRHKTSRHESSRHKTSRHERSRHK 60
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 608 DTSRHRPTRADTGRHEATRADASRHE 685
+TSRH +R + RHE + + SRH+
Sbjct: 15 ETSRHETSRHERSRHETRQHERSRHK 40
>SB_38071| Best HMM Match : ABC_membrane (HMM E-Value=1.2e-11)
Length = 1214
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -3
Query: 690 VGSCRLASARVASCRPVSARVGRCRLVSRCVLAVSV 583
V SC + S RV SC VS RV CR++S C+++ V
Sbjct: 261 VVSCCVVSCRVLSCCIVSCRVVSCRVLSCCIVSCLV 296
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 690 VGSCRLASARVASCRPVSARVGRCRLVSRCVLAVSV 583
V SCR+ S + SCR VS RV C +VS V+ V
Sbjct: 266 VVSCRVLSCCIVSCRVVSCRVLSCCIVSCLVVLYRV 301
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 684 SCRLASARVASCRPVSARVGRCRLVS 607
SC + S RV SCR V RV CR+VS
Sbjct: 348 SCCVVSCRVVSCRVVLYRVVSCRVVS 373
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = -3
Query: 714 SAVVEPAGVGSCRLASARVASC-----RPVSARVGRCRLVSRCVLAVSV 583
S + V SCR+ S + SC R VS RV CR++S C+++ V
Sbjct: 273 SCCIVSCRVVSCRVLSCCIVSCLVVLYRVVSCRVVSCRVLSCCIVSCLV 321
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Frame = -3
Query: 738 RTLESV*CSAVVEPAGVGSCRLASARVASC----------RPVSARVGRCRLVSRCVLAV 589
R L S +V V SCR+ S RV SC R VS RV CR++S C+++
Sbjct: 285 RVLSCCIVSCLVVLYRVVSCRVVSCRVLSCCIVSCLVVLYRVVSCRVVSCRVLSCCIVSC 344
Query: 588 SV 583
V
Sbjct: 345 LV 346
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = -3
Query: 738 RTLESV*CSAVVEPAGVGSCRLASARVASCRPVSARVGRCRLVSRCVLAVSV 583
R L S +V V SCR+ S RV SC VS V C +VS V++ V
Sbjct: 310 RVLSCCIVSCLVVLYRVVSCRVVSCRVLSCCIVSCLVLSCCVVSCRVVSCRV 361
>SB_51287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHEPT 691
DT +T T+RHR T T RH+ T +RH T
Sbjct: 232 DTEQTWTTTTRHRTTWTTTTRHQTTWTTTTRHRTT 266
>SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53)
Length = 291
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
DTAR DT+RH R T RH R A++H T T
Sbjct: 126 DTAR--HDTARHSTARHSTARHSNARHSAAQHSTTQYSKT 163
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST---TAEH*TLSNVLYFYN 751
T + ++ H R DT RH + D +RH T G+T T +H T YN
Sbjct: 213 TTQYSTTHGTARHDTARHNMAQQDTARHSKTQHGTTQHSTTQHSTTQYSTTQYN 266
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*T 724
+T DT++H R DT RH R +RH + A + A+H T
Sbjct: 114 NTTIVRHDTAQHDTARHDTARHSTARHSTARH--SNARHSAAQHST 157
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 590 TARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*T 724
T R DT++ T+ T +H+ T+ D ++H T TA+H T
Sbjct: 83 TTRQLYDTTQRSTTQHVTTQHDTTQHDTTQHNTTIVRHDTAQHDT 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 590 TARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
TAR DT+RH + DT RH T+ ++H T +T
Sbjct: 222 TAR--HDTARHNMAQQDTARHSKTQHGTTQHSTTQHSTT 258
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 587 DTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH 718
DT + + RH + DT RH+ R +RH + A + A H
Sbjct: 109 DTTQHNTTIVRHDTAQHDTARHDTARHSTARH--STARHSNARH 150
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 587 DTAR---THRDTSRHRPTRADTGRHEATRADASRHEPTPAGST 706
DTAR +DT+RH T+ T +H T+ +++ T +T
Sbjct: 226 DTARHNMAQQDTARHSKTQHGTTQHSTTQHSTTQYSTTQYNTT 268
>SB_42354| Best HMM Match : GETHR (HMM E-Value=5.3)
Length = 162
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 590 TARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAG 700
+A H DT RH +R DT R+ T+ D RH T G
Sbjct: 10 SANIH-DTVRHSTSRCDTVRYRTTQYDTLRHSTTRPG 45
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 565 FGVEFADRHSENTPRH*PTPADASRHRPTRGYTSRREPTRADTGRFHDGRALNT 726
+G + D H +T RH D RH T GY ++R T + HD +T
Sbjct: 651 YGTKQHDTHGYDTKRHDTLGYDTKRH-DTHGYDTKRHVTHGYDTKRHDTHDYDT 703
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 599 THRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAEH*TLSNVLYFYN 751
TH +T+RH D HE TR D H+ T + T H T N Y ++
Sbjct: 500 TH-ETTRHDTHLHDMHTHETTRHDTHLHDTTE--NDTHPHDTTGNDTYLHD 547
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 594 REHTATLADTGRREPTPADTRLHEPTRADTSRH 692
R H T DT + T DTR H+ T DT H
Sbjct: 574 RPHDTTGNDTHLHDTTGNDTRPHDTTENDTQPH 606
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 600 HTATLADTGRREPTPADTRLHEPTRADTSRH 692
H L DT E T DT LH+ +T+RH
Sbjct: 431 HDTHLHDTHTHETTRHDTHLHDTHTHETTRH 461
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 600 HTATLADTGRREPTPADTRLHEPTRADTSRH 692
H L DT E T DT LH+ +T+RH
Sbjct: 446 HDTHLHDTHTHETTRHDTHLHDTHTHETTRH 476
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 600 HTATLADTGRREPTPADTRLHEPTRADTSRH 692
H L DT E T DT LH+ +T+RH
Sbjct: 461 HDTHLHDTHTHETTRHDTHLHDTHTHETTRH 491
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 600 HTATLADTGRREPTPADTRLHEPTRADTSRH 692
H L DT E T DT LH+ +T+RH
Sbjct: 416 HDTHLHDTHPHETTRHDTHLHDTHTHETTRH 446
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 600 HTATLADTGRREPTPADTRLHEPTRADTSRH 692
H L DT E T DT LH+ +T+RH
Sbjct: 491 HDTHLYDTHTHETTRHDTHLHDMHTHETTRH 521
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 608 DTSRHRPTRADTGRHEATRADASRHEPT 691
DT RH +R DT R+ T+ D RH T
Sbjct: 936 DTVRHSTSRCDTVRYRTTQYDTLRHSTT 963
>SB_35| Best HMM Match : zf-U1 (HMM E-Value=0.12)
Length = 366
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRH--EATRADASRH-EPTPAGSTTA 712
R H D++ + P R +T RH AT A RH T G TTA
Sbjct: 133 RRHNDSATNAPRRCNTQRHNDSATNAPRQRHNSATLKGITTA 174
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 574 EFADRHSENTPRH*PTPADASRHRPTRGYTSRREPTR 684
E +D TP+H T + +H PT G T+ R P R
Sbjct: 246 EDSDLGDSATPKHKSTGSQGPKHDPTSGPTAMRFPKR 282
>SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 598 NTPRH*PTPADASRHRPTRGYTSRREPTRADT 693
N RH D SRH TR T++ P R DT
Sbjct: 46 NPKRHDTITPDTSRHNYTRNVTTQLHPKRHDT 77
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 586 RHSENTPRH*PTPADASRHRPTRGYTSRREPTRADT 693
RH+ RH SRH TR T++ P R DT
Sbjct: 109 RHNYTPKRHDTITPQTSRHNYTRYVTTQLHPIRHDT 144
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 579 RRQTQRE-HTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHSP 731
R+ T R+ +T + T + T DTR + T DT H PR +T+ +P
Sbjct: 450 RKCTYRQANTRSRTQTYKYTCTQIDTRKYTYTHPDTHMHVHAPRHANTRGAP 501
>SB_8153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 407 PAQEYRELAVDGDKPQNMMFT 469
P++E + +DGD PQN+ FT
Sbjct: 50 PSRELAPVTIDGDSPQNISFT 70
>SB_51223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +1
Query: 583 DRHSENTP---RH*PTPADASRHRPTRGYTSRREPTRADTGR 699
DRH + P RH P+ A RH P+ T R P+ T R
Sbjct: 69 DRHGPSDPPTDRHGPSDPSADRHGPSDPPTDRHGPSDPPTDR 110
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 580 ADRHSENTP---RH*PTPADASRHRPTRGYTSRREPTRADTGR 699
ADRH + P RH P+ RH P+ T R P+ T R
Sbjct: 88 ADRHGPSDPPTDRHGPSDPPTDRHGPSDPPTDRHGPSDPPTDR 130
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 600 HTATLADTGRREPTPADT-RLHEPTRADTSRHRPVPRRQS 716
H L+ RR P+P+ L P+R T R R PR +S
Sbjct: 1338 HVRALSRQQRRRPSPSSLGSLAPPSRTSTPRSRSTPRSRS 1377
>SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 687 GSCRLASARVASCRPVSARVGRCRLVSRC-VLAVSVGEL 574
G+ L V CRP+SA +G R S+C +L +GE+
Sbjct: 414 GNVLLLCYYVIKCRPISAFIGEERRASQCELLMCGLGEI 452
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 25.8 bits (54), Expect(2) = 8.3
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -3
Query: 369 LALEGRVLILAGLLGLCSTAPAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTP 202
L ++ R+++L + +C+ A ++ C +S T A C PPPP P
Sbjct: 54 LIMDKRIVLLVLAVAVCTEAKSLKGDK--KCDVSCMPTSCAPACPPACCAPPPPPP 107
Score = 20.6 bits (41), Expect(2) = 8.3
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -3
Query: 219 PPPPTPRTACV 187
PPPP P C+
Sbjct: 140 PPPPPPPAPCM 150
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 596 RTHRDTSRHRPTRADTGRHEATRADASRHEPT 691
+T + RH T +D RH T +D RH T
Sbjct: 23 QTSSEIIRHHQTSSDIVRHHQTSSDIIRHHQT 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,623,052
Number of Sequences: 59808
Number of extensions: 405260
Number of successful extensions: 1760
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1651
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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