Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0086
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   0.83 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   1.9  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   3.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.4  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   5.9  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   7.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.7  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3

Query: 219  PPPPTPRTACVERRTPAGSWAAAPLR 142
            PPPP+PRT   ERR      A A LR
Sbjct: 1080 PPPPSPRT---ERRREVNRLAVARLR 1102


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 263 DSESTQSGPVGGATAGAVEHKPSKPAK 343
           + ++  SGP G + A  VEHK  KPA+
Sbjct: 16  NEDAAASGPSGESAADVVEHK--KPAR 40


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 85 TACSAARCGLAACSHRILGTRCRQW 11
          T+C A RC  A+ S  IL TR R+W
Sbjct: 3  TSC-AWRCARASPSRPILTTRGRRW 26


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 264  SDTRRRRGGAGALCIPPPPTPRTACVERRTPAGSW 160
            SD ++++GG+    + PP T   +  +     GSW
Sbjct: 1191 SDDQKKKGGSETQLLHPPGTAPNSFHKSSPGRGSW 1225


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
 Frame = +1

Query: 580 ADRHSENTPRH*PTPADASRHR-----PTRGYTSRREPTRA 687
           A R +    R  P P  A RHR     P R +  RR PT A
Sbjct: 313 AVREAAGRLRTGPVPGAAERHRRRRPPPRRRHDRRRYPTNA 353


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 618 DTGRREPTPADTRLHEPTRADTSRHRPVPRRQST 719
           DTG+  P P   + HEP    TS  +  P + ST
Sbjct: 355 DTGK-PPKPPGGKRHEPGFVLTSSLKKAPFKSST 387


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 286 PRLRALRVRHTAAAGRSRGTLYPSPSHSEN 197
           PR + LR  H +AAG     LYPS  +  N
Sbjct: 398 PRYQMLRASHHSAAGH---PLYPSLPYPPN 424



 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -3

Query: 228  LCIPPPPTPRTACVERRT--PAGSWAA 154
            + +P PP P T+  +RRT  PA S AA
Sbjct: 1209 VALPAPPAPPTSKRDRRTSGPAVSDAA 1235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,301
Number of Sequences: 2352
Number of extensions: 11841
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)