Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0086
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB031038-1|BAA83417.1| 686|Homo sapiens hTbr2 protein. 33 1.5
M81750-1|AAA69696.1| 407|Homo sapiens myeloid cell nuclear diff... 32 2.0
BC032319-1|AAH32319.1| 407|Homo sapiens myeloid cell nuclear di... 32 2.0
BC020715-1|AAH20715.1| 310|Homo sapiens Unknown (protein for IM... 32 2.0
AL513205-11|CAH73796.1| 407|Homo sapiens myeloid cell nuclear d... 32 2.0
BC060820-1|AAH60820.1| 895|Homo sapiens zinc finger protein 281... 31 3.4
BC051905-1|AAH51905.1| 895|Homo sapiens zinc finger protein 281... 31 3.4
AJ132592-1|CAB70968.1| 895|Homo sapiens zinc finger protein pro... 31 3.4
AF125158-1|AAD21084.1| 895|Homo sapiens zinc finger DNA binding... 31 3.4
AK126249-1|BAC86503.1| 942|Homo sapiens protein ( Homo sapiens ... 31 4.5
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 6.0
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 6.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 6.0
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 6.0
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 6.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 6.0
EF028204-1|ABL77400.1| 633|Homo sapiens CDK5 and Abl enzyme sub... 30 7.9
AK074369-1|BAB85062.1| 132|Homo sapiens protein ( Homo sapiens ... 30 7.9
>AB031038-1|BAA83417.1| 686|Homo sapiens hTbr2 protein.
Length = 686
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -3
Query: 318 STAPAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTPR--TACVERRTPAGSWAAAPL 145
S PA A P +LS++D A A+ P PP R + C E P+ + AAA
Sbjct: 65 SGEPAAASAGAPAAMLSDTDAGDAFASAAAVAKPGPPDGRKGSPCGEEELPSAAAAAAAA 124
Query: 144 RRARCCSQHIS 112
A + S
Sbjct: 125 AAAAAATARYS 135
>M81750-1|AAA69696.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 257 VSDSESTQSGPVGGATAGAVEHKPSKPAKIKTLPSNAS 370
VS +S GP G +T+ AV+H P P + PSN S
Sbjct: 151 VSQEQSKPPGPSGASTSAAVDH-PPLPQTSSSTPSNTS 187
>BC032319-1|AAH32319.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 257 VSDSESTQSGPVGGATAGAVEHKPSKPAKIKTLPSNAS 370
VS +S GP G +T+ AV+H P P + PSN S
Sbjct: 151 VSQEQSKPPGPSGASTSAAVDH-PPLPQTSSSTPSNTS 187
>BC020715-1|AAH20715.1| 310|Homo sapiens Unknown (protein for
IMAGE:4717988) protein.
Length = 310
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 257 VSDSESTQSGPVGGATAGAVEHKPSKPAKIKTLPSNAS 370
VS +S GP G +T+ AV+H P P + PSN S
Sbjct: 151 VSQEQSKPPGPSGASTSAAVDH-PPLPQTSSSTPSNTS 187
>AL513205-11|CAH73796.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 257 VSDSESTQSGPVGGATAGAVEHKPSKPAKIKTLPSNAS 370
VS +S GP G +T+ AV+H P P + PSN S
Sbjct: 151 VSQEQSKPPGPSGASTSAAVDH-PPLPQTSSSTPSNTS 187
>BC060820-1|AAH60820.1| 895|Homo sapiens zinc finger protein 281
protein.
Length = 895
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = -3
Query: 312 APAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTPRTACVERRTPAGSWAAAPLRR 139
A + APP P CVLS S + A A PPPP P ++ PA S AA P +R
Sbjct: 67 AGSAAPP--PQCVLSSSTS-----AAPAAEPPPPPAPDMTF--KKEPAASAAAFPSQR 115
>BC051905-1|AAH51905.1| 895|Homo sapiens zinc finger protein 281
protein.
Length = 895
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = -3
Query: 312 APAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTPRTACVERRTPAGSWAAAPLRR 139
A + APP P CVLS S + A A PPPP P ++ PA S AA P +R
Sbjct: 67 AGSAAPP--PQCVLSSSTS-----AAPAAEPPPPPAPDMTF--KKEPAASAAAFPSQR 115
>AJ132592-1|CAB70968.1| 895|Homo sapiens zinc finger protein
protein.
Length = 895
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = -3
Query: 312 APAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTPRTACVERRTPAGSWAAAPLRR 139
A + APP P CVLS S + A A PPPP P ++ PA S AA P +R
Sbjct: 67 AGSAAPP--PQCVLSSSTS-----AAPAAEPPPPPAPDMTF--KKEPAASAAAFPSQR 115
>AF125158-1|AAD21084.1| 895|Homo sapiens zinc finger DNA binding
protein 99 protein.
Length = 895
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = -3
Query: 312 APAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTPRTACVERRTPAGSWAAAPLRR 139
A + APP P CVLS S + A A PPPP P ++ PA S AA P +R
Sbjct: 67 AGSAAPP--PQCVLSSSTS-----AAPAAEPPPPPAPDMTF--KKEPAASAAAFPSQR 115
>AK126249-1|BAC86503.1| 942|Homo sapiens protein ( Homo sapiens cDNA
FLJ44261 fis, clone TLIVE2001327, moderately similar to
Human DOCK180 protein mRNA. ).
Length = 942
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -3
Query: 315 TAPAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTPRTACVERRTPAGSWAAAPL 145
+ P PP P + S + G A +PPPP P++ E + + A PL
Sbjct: 857 STPLSPPPLTPKATRTLSSPSLQTDGIAATPVPPPPPPKSKPYEGSQRSSTELAPPL 913
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 579 RRQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHSPM 734
RR R T + R PT +R P R SR R RR+S SP+
Sbjct: 580 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPV 631
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 579 RRQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHSPM 734
RR R T + R PT +R P R SR R RR+S SP+
Sbjct: 580 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPV 631
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 579 RRQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHSPM 734
RR R T + R PT +R P R SR R RR+S SP+
Sbjct: 580 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPV 631
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 579 RRQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHSPM 734
RR R T + R PT +R P R SR R RR+S SP+
Sbjct: 545 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPV 596
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 579 RRQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHSPM 734
RR R T + R PT +R P R SR R RR+S SP+
Sbjct: 370 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPV 421
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 579 RRQTQREHTATLADTGRREPTPADTRLHEPTRADTSRHRPVPRRQSTKHSPM 734
RR R T + R PT +R P R SR R RR+S SP+
Sbjct: 628 RRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPV 679
>EF028204-1|ABL77400.1| 633|Homo sapiens CDK5 and Abl enzyme
substrate 1 protein.
Length = 633
Score = 30.3 bits (65), Expect = 7.9
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Frame = -3
Query: 396 ASSMQGCMVLALEGRVLI-LAGLLGLCSTAPAVAPPTGPDCVLSESDTRRRRG-----GA 235
A+ GC+ LA G LA G C P+ PP P + S RG GA
Sbjct: 113 AAERGGCIALAAPGTPAAGLAAGSGPCLPQPSSLPPLIPGGHATVSGPGVARGFASPLGA 172
Query: 234 GALC----IPPPPTPRTACVERRTPAGSWAA 154
G PP P P AC + + GS AA
Sbjct: 173 GRASGEQWQPPRPAPLAACAQLQLLDGSGAA 203
>AK074369-1|BAB85062.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ23789 fis, clone HEP21465. ).
Length = 132
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 717 CSAVVEPAGVGSCRLASARVASCRPVSARVGRCRLVSRCVL 595
C V E G+CRL+ + + S RV CR ++RC++
Sbjct: 71 CCLVHEQTYRGACRLSPRALVLLKEFSGRVRPCRELARCLV 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,805,746
Number of Sequences: 237096
Number of extensions: 1901757
Number of successful extensions: 9135
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9069
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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