Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0086
(758 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g27350.5 68415.m03295 OTU-like cysteine protease family prote... 31 0.63
At2g27350.4 68415.m03294 OTU-like cysteine protease family prote... 31 0.63
At2g27350.3 68415.m03293 OTU-like cysteine protease family prote... 31 0.63
At2g27350.2 68415.m03292 OTU-like cysteine protease family prote... 31 0.63
At2g27350.1 68415.m03291 OTU-like cysteine protease family prote... 31 0.63
At5g25170.1 68418.m02984 expressed protein 30 1.9
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 29 2.5
At2g39440.1 68415.m04841 expressed protein 29 4.4
At3g03140.1 68416.m00310 expressed protein 28 5.9
At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp... 28 7.7
At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp... 28 7.7
At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp... 28 7.7
At3g54610.1 68416.m06042 histone acetyltransferase (GCN5) nearly... 28 7.7
>At2g27350.5 68415.m03295 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 309 PAVAPPTGPDCVLSESDTRRRRGGAGALCIPP---PPTPRTACVERRTPAGSWAAAP 148
P APP P ++ R G GAL I P PR+ R +P GS ++P
Sbjct: 116 PVPAPPPKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSP 172
>At2g27350.4 68415.m03294 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 309 PAVAPPTGPDCVLSESDTRRRRGGAGALCIPP---PPTPRTACVERRTPAGSWAAAP 148
P APP P ++ R G GAL I P PR+ R +P GS ++P
Sbjct: 116 PVPAPPPKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSP 172
>At2g27350.3 68415.m03293 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 506
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 309 PAVAPPTGPDCVLSESDTRRRRGGAGALCIPP---PPTPRTACVERRTPAGSWAAAP 148
P APP P ++ R G GAL I P PR+ R +P GS ++P
Sbjct: 116 PVPAPPPKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSP 172
>At2g27350.2 68415.m03292 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 309 PAVAPPTGPDCVLSESDTRRRRGGAGALCIPP---PPTPRTACVERRTPAGSWAAAP 148
P APP P ++ R G GAL I P PR+ R +P GS ++P
Sbjct: 116 PVPAPPPKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSP 172
>At2g27350.1 68415.m03291 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 309 PAVAPPTGPDCVLSESDTRRRRGGAGALCIPP---PPTPRTACVERRTPAGSWAAAP 148
P APP P ++ R G GAL I P PR+ R +P GS ++P
Sbjct: 116 PVPAPPPKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSP 172
>At5g25170.1 68418.m02984 expressed protein
Length = 218
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 294 PTGPDCVLSESDTRRRRGGAGALCIPPPPT 205
P GP S S R RRG C+PP PT
Sbjct: 186 PPGPSLSSSGSLNRSRRGERRRQCLPPSPT 215
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -3
Query: 351 VLILAGLLGLCSTAPAVAPPTGPDCVLSESDTRRRRGGAGALCIPPPPTPRTACVERRTP 172
V++L L + S+A A AP P S + R A I P PTP + P
Sbjct: 6 VVVLLFLALIASSAIAQAPGPAPTRSPLPSPAQPPRTAAPTPSITPTPTPTPSATPTAAP 65
Query: 171 AGSWAAAPL 145
A +PL
Sbjct: 66 VSPPAGSPL 74
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 722 FSALPSWNRPVSARVGS 672
FSA P+W +PVS R+G+
Sbjct: 689 FSATPTWKKPVSRRLGT 705
>At3g03140.1 68416.m00310 expressed protein
Length = 769
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 584 TDTARTHRDTSRHRPTRADTGRHEATRADASRHEPTPAGSTTAE 715
TD++ DT P + GRH R SRH ST++E
Sbjct: 315 TDSSDMEEDTDDDIPLLSGAGRHSERRNTFSRHTSGEDESTSSE 358
>At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 267 ESDTRRRRGGAGALCIPPPP 208
E D+ +R+GGA CIPPPP
Sbjct: 569 ERDSPQRKGGA---CIPPPP 585
>At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 267 ESDTRRRRGGAGALCIPPPP 208
E D+ +R+GGA CIPPPP
Sbjct: 569 ERDSPQRKGGA---CIPPPP 585
>At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 267 ESDTRRRRGGAGALCIPPPP 208
E D+ +R+GGA CIPPPP
Sbjct: 569 ERDSPQRKGGA---CIPPPP 585
>At3g54610.1 68416.m06042 histone acetyltransferase (GCN5) nearly
identical to histone acetyltransferase GCN5 [Arabidopsis
thaliana] GI:13591696; contains Pfam profiles PF00583:
acetyltransferase, GNAT family, PF00439: Bromodomain
Length = 568
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 259 HTAAAGRSRGTLYPSPSHSENS 194
H AA RSR + PSPSHS ++
Sbjct: 7 HLNAANRSRSSQTPSPSHSASA 28
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,844,558
Number of Sequences: 28952
Number of extensions: 251125
Number of successful extensions: 938
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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