Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0085
         (848 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1S9W6 Cluster: Putative diguanylate cyclase (GGDEF dom...    35   3.0  
UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3; ...    33   9.1  

>UniRef50_A1S9W6 Cluster: Putative diguanylate cyclase (GGDEF domain
           protein) precursor; n=1; Shewanella amazonensis
           SB2B|Rep: Putative diguanylate cyclase (GGDEF domain
           protein) precursor - Shewanella amazonensis (strain ATCC
           BAA-1098 / SB2B)
          Length = 557

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 401 FIYSHYSYIALIIETFYTEIRIFKYWLGFSSMTMFSHPLILTTY 270
           F YS + +  +++   YT    F +W G S    +SHP+++T Y
Sbjct: 209 FYYSLFLFSFILLNLSYTGHGQFWFWPGLSHWRQWSHPMLMTLY 252


>UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1834

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = -1

Query: 572 DKQTWKQLVRYKINEL*VRECSNNSKRHFNKQRINGVYIIS-QSTRGN*KRSKHGYLMFI 396
           ++QT+K L+  +IN   ++E +   +   N +R++  YI S ++      ++ H     I
Sbjct: 147 NEQTYKYLISDEINNK-IQEQNEICQNKDNTKRVD--YINSYENNEFVILKNTH----II 199

Query: 395 YSHYSYIALIIETFYTEIRIFKYWLGFSSMTMFSHPLILTTYM 267
           Y++ S  +   ETF T + IF +   F  +    HPLI  TY+
Sbjct: 200 YNNTSISSKKFETFSTNLIIFNHNYEFEILFNIIHPLIYNTYI 242


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,486,666
Number of Sequences: 1657284
Number of extensions: 16182079
Number of successful extensions: 31635
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31630
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)