Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0085
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   3.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.3  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 247 LQGNNHNTYRVQEDIDQQFII 185
           ++G N+  YRV+E     FI+
Sbjct: 197 VEGRNYRKYRVEERTSDGFIV 217


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 312 FHDNVFTSINTNHLYESKTWIN 247
           F+   FT  N+N  Y   T+IN
Sbjct: 268 FYGRTFTLSNSNTNYNPGTYIN 289


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 169 FPTELSLCN 143
           FPTEL+ CN
Sbjct: 220 FPTELTFCN 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,192
Number of Sequences: 336
Number of extensions: 4625
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)