Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0085
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0514 + 29686263-29686728,29687078-29687313,29687435-296875...    32   0.50 
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971...    30   2.7  

>02_05_0514 +
           29686263-29686728,29687078-29687313,29687435-29687575,
           29687685-29687915
          Length = 357

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 350 TEIRIFKYWLGFSSMTMFSHPLILTTYMKVKPG*ITRE*SQHVSCSRRY 204
           T  R   YWLG +     +H     +Y+ +KPG   R+   H S + RY
Sbjct: 80  TNRRNGSYWLGLNHFADIAHEEFKASYLGLKPGLARRDAQPHGSTTFRY 128


>01_06_0160 -
           27095727-27096008,27096164-27096652,27096983-27097132,
           27097656-27097920,27097995-27098274,27100311-27100388,
           27100597-27101240,27101334-27101412,27101489-27101612,
           27101782-27101882,27102870-27103068
          Length = 896

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -1

Query: 125 TNACPINNKRNASR*PCGPP*VTSQSSVHPYNHYAAPL 12
           +NA P  N  +AS  P GPP +  Q SVHPY     PL
Sbjct: 648 SNAQPTQNLPSASI-PSGPP-LPQQLSVHPYPQPTLPL 683


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,001,144
Number of Sequences: 37544
Number of extensions: 401896
Number of successful extensions: 768
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)