Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0084
         (833 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.14 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   3.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   3.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 152 KETDSDNQSDAKKEDNEQSQTVKTKF 229
           ++   D   D KKED ++ +T+K K+
Sbjct: 248 EDVGEDEDEDTKKEDKKKKKTIKEKY 273


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = -1

Query: 377 LPYVLHRCVRPKYRSPSSHRPNFPSPAPIDILSLLPRMKYMCLPS 243
           LP+  H        +P+++  +  +P    ++SL+  + YM  P+
Sbjct: 494 LPFRFHIYTPEDLFAPNTYNRHLVAPNGDHVISLIDEISYMAPPA 538


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 194 DNEQSQTVKTKF 229
           DNEQS T+KT++
Sbjct: 327 DNEQSVTIKTEY 338


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +2

Query: 122 HGPVHADDANKETDSDNQSDAKKEDN 199
           HG + ++   K+ D D+ +D  ++D+
Sbjct: 184 HGRIKSERNGKDLDDDDMNDDDRKDD 209


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = -1

Query: 419 MIFTMKSSRVVSGSLPYVLHRCVRPKYR--SPSSHRP 315
           M+F   SS      LP+ +    RPK +   PS H P
Sbjct: 72  MVFNDYSSEYEKCDLPFNIDCTSRPKLQEPQPSQHCP 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,762
Number of Sequences: 336
Number of extensions: 3440
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)