Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0084
(833 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0829 - 6254769-6254852,6254940-6255024,6255158-6255245,625... 50 2e-06
02_05_0784 + 31726453-31726563,31726820-31726897,31727307-317278... 50 2e-06
07_03_0171 + 14687791-14687898,14688465-14688550,14689474-146895... 49 5e-06
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 33 0.21
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 33 0.37
12_01_0371 - 2851186-2851491,2851582-2851765,2851967-2852156,285... 32 0.65
01_05_0409 - 21896478-21897005,21897098-21897292,21897405-218975... 32 0.65
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 30 2.0
08_01_0626 - 5445676-5446687,5447099-5447430 30 2.6
01_01_0690 - 5306754-5307047,5307107-5307279,5308223-5308370,530... 30 2.6
01_06_1310 - 36176008-36176472,36176547-36176774,36177313-361780... 29 3.5
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696... 29 3.5
01_01_0039 + 302332-302471,302981-303509,304345-304389,304572-30... 29 3.5
06_03_0789 + 24630552-24631171,24631240-24631279,24632422-246324... 29 4.6
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 29 4.6
01_06_1480 - 37660591-37660720,37660899-37660930,37661061-376611... 29 6.0
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363 28 8.0
06_02_0296 + 13888946-13889207,13889567-13889616 28 8.0
02_04_0426 - 22802143-22802667,22804929-22805129 28 8.0
>06_01_0829 -
6254769-6254852,6254940-6255024,6255158-6255245,
6255344-6255407,6255496-6255576,6256709-6256781,
6256871-6257385,6258168-6258284
Length = 368
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMEC 426
G + YF S D +++G G G F L+LDGDL G + +T+ N L+ +F VK +E
Sbjct: 284 GANNYFTFCSTDYLAMGGG-GHFALYLDGDLLNGSSSTSETFNNPCLSRSREFEVKDVEL 342
Query: 427 WTFI 438
W F+
Sbjct: 343 WGFV 346
>02_05_0784 +
31726453-31726563,31726820-31726897,31727307-31727843,
31728225-31728305,31728394-31728457,31728738-31728825,
31728934-31729018,31729103-31729186
Length = 375
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMEC 426
G + YF S D +++G G G F L+LD DL G + +T+ N L+ DF VK +E
Sbjct: 291 GANNYFTVCSTDYLALGGG-GHFALYLDADLLSGSSSNSETFNNMCLSHSPDFAVKDVEL 349
Query: 427 WTFI 438
W F+
Sbjct: 350 WGFV 353
>07_03_0171 +
14687791-14687898,14688465-14688550,14689474-14689546,
14689661-14689741,14690010-14690073,14690673-14690760,
14690843-14690927,14692190-14692228
Length = 207
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMEC 426
G + Y+ ND ++ G G G F L LD DL G + C+T+GN L DF +K +E
Sbjct: 138 GANRYYYLCLNDALAFGGG-GSFALCLDEDLLHGTSGSCQTFGNSCLAHSPDFELKNVEL 196
Query: 427 WTF 435
W F
Sbjct: 197 WGF 199
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 113 PGAHGPVHADDANKETDSDNQSDAKKEDNEQSQT 214
PG + +H D + ETD D+ S+ DN +S+T
Sbjct: 415 PGINKHIHFDSTDDETDGDSSSEGDAVDNSESKT 448
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 32.7 bits (71), Expect = 0.37
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Frame = +2
Query: 26 SCALHPSEHFYGTGESFLYSFQRIEEDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQ 205
S + + SE G+ SFL + EED H + DA+ ++DSD+ S A +
Sbjct: 9 SSSRYASEEERGSN-SFLIESEEEEEDEEAHPHSSILLKDADSDSDSDDSSCATPRPSSY 67
Query: 206 S-----QTVKTKFKYWGWTGDTCISFVGATTIYR-SALAMENSVCGWT 331
+ Q+ + + +SF+G T+ R S + NS G T
Sbjct: 68 ATHQWPQSYRQSIDIYSSVQSPNLSFLGTPTLSRLSNSFLTNSFRGKT 115
>12_01_0371 -
2851186-2851491,2851582-2851765,2851967-2852156,
2853375-2853613,2853862-2853947,2854720-2854827,
2854929-2855031,2855152-2855213
Length = 425
Score = 31.9 bits (69), Expect = 0.65
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 274 SNDNISIGAGDG----KFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMECW 429
S+D+I G G G FG +L + G + C T+ + L+ F +++ECW
Sbjct: 330 SSDSIPNGIGFGGQPHHFGFFLSANFDQGHSFTCTTFTSPALSKTNRFRPEVIECW 385
>01_05_0409 -
21896478-21897005,21897098-21897292,21897405-21897542,
21897641-21897728,21897837-21897925,21898032-21898553
Length = 519
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 335 SPSSHRPNFPSPAPIDILSLLPRMKYMCLPS 243
SP+++R PSP P + L PR+ YM LP+
Sbjct: 451 SPTTNRLPIPSPRPSPKIRLSPRLHYMGLPT 481
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +2
Query: 140 DDANK--ETDSDNQSDAKKEDNE-QSQTVKTKFKYW 238
DD K ETD DN DAK +D E QSQ + + W
Sbjct: 205 DDTEKHMETDKDNDKDAKDKDKEGQSQPHRKPRRCW 240
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +2
Query: 68 ESFLYSFQRIEEDTSPGAHGPVHADDANKETDSDNQSDAKKEDNE 202
+ FLY + +++D G +D ++ D D++ + +ED +
Sbjct: 212 DEFLYEDENVDDDEDEGEEDEEIEEDEDENNDDDDEEEEMEEDED 256
>01_01_0690 -
5306754-5307047,5307107-5307279,5308223-5308370,
5309110-5309356,5309694-5309839,5312482-5312707,
5313652-5313874,5314054-5314202,5315345-5315514,
5316064-5316135,5317610-5317741,5317813-5317900,
5319440-5319656,5320123-5320306,5320644-5320727,
5321148-5321242,5321519-5321562,5321707-5322367,
5323053-5323356
Length = 1218
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 669 CPDTSAALRWRVNPSQLSLSKLEKRR 746
CPDT+ LR V+P L+L +LE R+
Sbjct: 287 CPDTTNVLREVVSPQMLALGELEFRK 312
>01_06_1310 -
36176008-36176472,36176547-36176774,36177313-36178080,
36178250-36178732,36179883-36180010,36180539-36180607,
36180688-36180892,36181005-36181067
Length = 802
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 86 FQRIEEDTSPGAHGPVHADDANK-ETDSDNQSDAKKEDNEQSQ 211
F+R+ D S HG H+++ NK + D ++SD+KK+ + Q
Sbjct: 79 FRRLFSDKSKKNHGK-HSEEENKGKGDESDKSDSKKQSSSGDQ 120
>01_06_0357 -
28668894-28669238,28669510-28669537,28669578-28669635,
28669836-28669916,28670395-28670526,28670609-28670926,
28672495-28673317
Length = 594
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 377 LPYVLHRCVRPKYRSPSSHRPNFPSPAPIDILSLL-PRMKYMCLPSIP 237
LP HR P SP + P P+P L+LL P LPS+P
Sbjct: 18 LPLTAHRLPLPPATSPPASLLLAPRPSPTRALALLFPDSSARLLPSLP 65
>01_01_0039 +
302332-302471,302981-303509,304345-304389,304572-304718,
304834-304899,304993-305058,305171-305257
Length = 359
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 700 RQRSAALVSGHASILDEHV 644
RQ +AA V GH+SI DEHV
Sbjct: 185 RQAAAAAVVGHSSIRDEHV 203
>06_03_0789 +
24630552-24631171,24631240-24631279,24632422-24632486,
24632615-24632660,24633222-24633314,24633736-24633855,
24633931-24633982,24634051-24634123,24634350-24634416,
24634670-24634720,24635026-24635118,24635207-24635308
Length = 473
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 95 IEEDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQTVKTKFK 232
+E + PGA GPV +A +E S D +E + +VK K
Sbjct: 9 VESEAEPGADGPVDEANAVEEEKSGKGEDGIEEAADTVDSVKDSAK 54
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 683 ACIRTRIDTRRARKHWSGLSTLD*GRVVTTKILTQLHRNV 564
AC +T D + R+ W+ L+ L G V KI +HRNV
Sbjct: 249 ACGKTGYDYQSVRR-WTTLNRLGYGLVECEKIFIPIHRNV 287
>01_06_1480 - 37660591-37660720,37660899-37660930,37661061-37661155,
37661460-37661527,37661608-37661694,37662884-37662912,
37663019-37663138,37663854-37663905,37663986-37664050,
37664174-37664536,37664637-37664711,37664803-37664940,
37665025-37665181,37665471-37665478,37665576-37665710,
37665965-37666082,37666791-37666915,37667571-37667717,
37668297-37668380,37668671-37668800,37669196-37669347,
37669678-37669857,37670660-37670731,37671104-37671295,
37671366-37671411,37671498-37671647,37671725-37671882,
37671995-37672101,37672191-37672407,37672484-37672696,
37672852-37672972,37673072-37673253,37673475-37673672,
37674770-37674967
Length = 1447
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 116 GAHGPVHADDANKETDSDNQSDAKKEDNE 202
GAHGPVH DD +++ S D E
Sbjct: 1094 GAHGPVHPDDTKCSDNAERVSTEVAPDKE 1122
>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
Length = 394
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = +2
Query: 83 SFQRIEEDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQ 211
S++ ED + ++ H D+ N++ D D+ + + ED ++ +
Sbjct: 351 SYENPFEDENEDSYKGEHEDEDNEDEDEDDDDEDEDEDEDEDE 393
>06_02_0296 + 13888946-13889207,13889567-13889616
Length = 103
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 228 SSTGDGRETHVFHSW---EQRQYIDRRWRWKIRSVAGRRPVL 344
++TGD R + W EQRQ++DRR +R AG R L
Sbjct: 16 ATTGDSRLSEEKRRWLGEEQRQWLDRRGWPAMRRRAGGRSTL 57
>02_04_0426 - 22802143-22802667,22804929-22805129
Length = 241
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1
Query: 359 RCVRPKYRSPSSHRPNFPSPA 297
R VRP +RS S NFPSPA
Sbjct: 194 RSVRPMWRSFESAMANFPSPA 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,637,783
Number of Sequences: 37544
Number of extensions: 411938
Number of successful extensions: 1518
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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