Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0084
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical p... 71 8e-13
U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical p... 71 8e-13
U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical p... 71 8e-13
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 29 3.1
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 29 3.1
Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical pr... 29 4.1
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 4.1
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 29 4.1
Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 29 5.4
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 5.4
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 5.4
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 28 7.2
>U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical
protein F52E1.13b protein.
Length = 440
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +1
Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLT-TREDFIVKIME 423
G + YF+ + D++SIGAG G+ GLWLD DL G +Q+C+T+ NEPL +DFI++ +E
Sbjct: 375 GDNQYFVNAAKDSLSIGAGSGRNGLWLDADLNHGSSQKCETFDNEPLCGDDQDFIIQFIE 434
Query: 424 CWTF 435
+ F
Sbjct: 435 AYGF 438
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 5 NVFGAMTSCALHPSEHFYGTGESFL 79
+VFGA+ S A+ P++HF+GTG+S L
Sbjct: 330 HVFGAVVSSAIRPNDHFFGTGDSCL 354
>U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical
protein F52E1.13c protein.
Length = 819
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +1
Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLT-TREDFIVKIME 423
G + YF+ + D++SIGAG G+ GLWLD DL G +Q+C+T+ NEPL +DFI++ +E
Sbjct: 754 GDNQYFVNAAKDSLSIGAGSGRNGLWLDADLNHGSSQKCETFDNEPLCGDDQDFIIQFIE 813
Query: 424 CWTF 435
+ F
Sbjct: 814 AYGF 817
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 5 NVFGAMTSCALHPSEHFYGTGESFL 79
+VFGA+ S A+ P++HF+GTG+S L
Sbjct: 709 HVFGAVVSSAIRPNDHFFGTGDSCL 733
>U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical
protein F52E1.13a protein.
Length = 840
Score = 71.3 bits (167), Expect = 8e-13
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +1
Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLT-TREDFIVKIME 423
G + YF+ + D++SIGAG G+ GLWLD DL G +Q+C+T+ NEPL +DFI++ +E
Sbjct: 775 GDNQYFVNAAKDSLSIGAGSGRNGLWLDADLNHGSSQKCETFDNEPLCGDDQDFIIQFIE 834
Query: 424 CWTF 435
+ F
Sbjct: 835 AYGF 838
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 5 NVFGAMTSCALHPSEHFYGTGESFL 79
+VFGA+ S A+ P++HF+GTG+S L
Sbjct: 730 HVFGAVVSSAIRPNDHFFGTGDSCL 754
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 80 YSFQRIE---EDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQ 211
YS++ I+ +D S + G DD+ +E D D++ +E SQ
Sbjct: 707 YSYENIDGVGDDASSDSRGKTDRDDSEEEEDDDSRRGGDTSHDEDSQ 753
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 80 YSFQRIE---EDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQ 211
YS++ I+ +D S + G DD+ +E D D++ +E SQ
Sbjct: 707 YSYENIDGVGDDASSDSRGKTDRDDSEEEEDDDSRRGGDTSHDEDSQ 753
>Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical
protein R06B9.2 protein.
Length = 258
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -1
Query: 194 LPFWRRFDYLNLFLCSXXXXXXXXXXXGSCLPQSFETNRGTIRQYRR 54
+P WR+ D L S LP SFE N G IR + R
Sbjct: 85 VPLWRKTDKAARLLPGKYEWQFWFQLPCSVLPPSFEGNNGNIRYWVR 131
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 98 EEDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQTVK 220
+ S G AD+ N E + DA +ED+E+ +T++
Sbjct: 1842 QRQASAETDGDADADETNSEDKTVGADDAMEEDDEEEETME 1882
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 333 SVQPQTEFSIASADRYIVVAPTNEIHVSPVHPQ 235
SV TEF + S D Y V PT+E H P+ Q
Sbjct: 602 SVPEPTEFQL-SRDIYSTVKPTDEAHSPPIQAQ 633
>Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 343 LGRTQRCKTYGNEPLTTREDFIVKIMECWTFI 438
+G R YGN+ L ++ F+ K+ C TF+
Sbjct: 569 IGDINRINKYGNQSLCVQDQFLRKLCFCSTFL 600
>Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 343 LGRTQRCKTYGNEPLTTREDFIVKIMECWTFI 438
+G R YGN+ L ++ F+ K+ C TF+
Sbjct: 569 IGDINRINKYGNQSLCVQDQFLRKLCFCSTFL 600
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 137 ADDANKETDSDNQSDAKKEDNEQSQ 211
AD+ + E SD +SD + ED+E+S+
Sbjct: 413 ADEDDDEESSDEESDEESEDSEESE 437
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 137 ADDANKETDSDNQSDAKKEDNEQSQ 211
AD+ + E SD +SD + ED+E+S+
Sbjct: 413 ADEDDDEESSDEESDEESEDSEESE 437
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 140 DDANKETDSDNQSDAKKEDNEQSQTVKTKFKY 235
DD++ +DSD + D K++ +++S+ K K ++
Sbjct: 166 DDSDDSSDSDEEEDRKRKKSKESKKEKRKRRH 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,463,167
Number of Sequences: 27780
Number of extensions: 348691
Number of successful extensions: 1343
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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