BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0084 (833 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical p... 71 8e-13 U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical p... 71 8e-13 U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical p... 71 8e-13 Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 29 3.1 AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 29 3.1 Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical pr... 29 4.1 U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 4.1 AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 29 4.1 Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 29 5.4 Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 29 5.4 DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 5.4 AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 5.4 U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 28 7.2 >U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical protein F52E1.13b protein. Length = 440 Score = 71.3 bits (167), Expect = 8e-13 Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +1 Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLT-TREDFIVKIME 423 G + YF+ + D++SIGAG G+ GLWLD DL G +Q+C+T+ NEPL +DFI++ +E Sbjct: 375 GDNQYFVNAAKDSLSIGAGSGRNGLWLDADLNHGSSQKCETFDNEPLCGDDQDFIIQFIE 434 Query: 424 CWTF 435 + F Sbjct: 435 AYGF 438 Score = 37.5 bits (83), Expect = 0.012 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +2 Query: 5 NVFGAMTSCALHPSEHFYGTGESFL 79 +VFGA+ S A+ P++HF+GTG+S L Sbjct: 330 HVFGAVVSSAIRPNDHFFGTGDSCL 354 >U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical protein F52E1.13c protein. Length = 819 Score = 71.3 bits (167), Expect = 8e-13 Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +1 Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLT-TREDFIVKIME 423 G + YF+ + D++SIGAG G+ GLWLD DL G +Q+C+T+ NEPL +DFI++ +E Sbjct: 754 GDNQYFVNAAKDSLSIGAGSGRNGLWLDADLNHGSSQKCETFDNEPLCGDDQDFIIQFIE 813 Query: 424 CWTF 435 + F Sbjct: 814 AYGF 817 Score = 37.5 bits (83), Expect = 0.012 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +2 Query: 5 NVFGAMTSCALHPSEHFYGTGESFL 79 +VFGA+ S A+ P++HF+GTG+S L Sbjct: 709 HVFGAVVSSAIRPNDHFFGTGDSCL 733 >U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical protein F52E1.13a protein. Length = 840 Score = 71.3 bits (167), Expect = 8e-13 Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +1 Query: 247 GRHMYFIRGSNDNISIGAGDGKFGLWLDGDLYLGRTQRCKTYGNEPLT-TREDFIVKIME 423 G + YF+ + D++SIGAG G+ GLWLD DL G +Q+C+T+ NEPL +DFI++ +E Sbjct: 775 GDNQYFVNAAKDSLSIGAGSGRNGLWLDADLNHGSSQKCETFDNEPLCGDDQDFIIQFIE 834 Query: 424 CWTF 435 + F Sbjct: 835 AYGF 838 Score = 37.5 bits (83), Expect = 0.012 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +2 Query: 5 NVFGAMTSCALHPSEHFYGTGESFL 79 +VFGA+ S A+ P++HF+GTG+S L Sbjct: 730 HVFGAVVSSAIRPNDHFFGTGDSCL 754 >Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical protein F35G12.3a protein. Length = 1077 Score = 29.5 bits (63), Expect = 3.1 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +2 Query: 80 YSFQRIE---EDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQ 211 YS++ I+ +D S + G DD+ +E D D++ +E SQ Sbjct: 707 YSYENIDGVGDDASSDSRGKTDRDDSEEEEDDDSRRGGDTSHDEDSQ 753 >AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine/threonine kinase protein. Length = 1077 Score = 29.5 bits (63), Expect = 3.1 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +2 Query: 80 YSFQRIE---EDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQ 211 YS++ I+ +D S + G DD+ +E D D++ +E SQ Sbjct: 707 YSYENIDGVGDDASSDSRGKTDRDDSEEEEDDDSRRGGDTSHDEDSQ 753 >Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical protein R06B9.2 protein. Length = 258 Score = 29.1 bits (62), Expect = 4.1 Identities = 16/47 (34%), Positives = 19/47 (40%) Frame = -1 Query: 194 LPFWRRFDYLNLFLCSXXXXXXXXXXXGSCLPQSFETNRGTIRQYRR 54 +P WR+ D L S LP SFE N G IR + R Sbjct: 85 VPLWRKTDKAARLLPGKYEWQFWFQLPCSVLPPSFEGNNGNIRYWVR 131 >U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical protein C34D4.14 protein. Length = 2761 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +2 Query: 98 EEDTSPGAHGPVHADDANKETDSDNQSDAKKEDNEQSQTVK 220 + S G AD+ N E + DA +ED+E+ +T++ Sbjct: 1842 QRQASAETDGDADADETNSEDKTVGADDAMEEDDEEEETME 1882 >AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical protein Y56A3A.30 protein. Length = 767 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -3 Query: 333 SVQPQTEFSIASADRYIVVAPTNEIHVSPVHPQ 235 SV TEF + S D Y V PT+E H P+ Q Sbjct: 602 SVPEPTEFQL-SRDIYSTVKPTDEAHSPPIQAQ 633 >Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical protein F10C2.3 protein. Length = 604 Score = 28.7 bits (61), Expect = 5.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 343 LGRTQRCKTYGNEPLTTREDFIVKIMECWTFI 438 +G R YGN+ L ++ F+ K+ C TF+ Sbjct: 569 IGDINRINKYGNQSLCVQDQFLRKLCFCSTFL 600 >Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical protein F10C2.3 protein. Length = 604 Score = 28.7 bits (61), Expect = 5.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 343 LGRTQRCKTYGNEPLTTREDFIVKIMECWTFI 438 +G R YGN+ L ++ F+ K+ C TF+ Sbjct: 569 IGDINRINKYGNQSLCVQDQFLRKLCFCSTFL 600 >DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic translation initiationfactor eIF5B protein. Length = 1074 Score = 28.7 bits (61), Expect = 5.4 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +2 Query: 137 ADDANKETDSDNQSDAKKEDNEQSQ 211 AD+ + E SD +SD + ED+E+S+ Sbjct: 413 ADEDDDEESSDEESDEESEDSEESE 437 >AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical protein Y54F10BM.2 protein. Length = 1173 Score = 28.7 bits (61), Expect = 5.4 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +2 Query: 137 ADDANKETDSDNQSDAKKEDNEQSQ 211 AD+ + E SD +SD + ED+E+S+ Sbjct: 413 ADEDDDEESSDEESDEESEDSEESE 437 >U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical protein C13F10.7 protein. Length = 222 Score = 28.3 bits (60), Expect = 7.2 Identities = 10/32 (31%), Positives = 22/32 (68%) Frame = +2 Query: 140 DDANKETDSDNQSDAKKEDNEQSQTVKTKFKY 235 DD++ +DSD + D K++ +++S+ K K ++ Sbjct: 166 DDSDDSSDSDEEEDRKRKKSKESKKEKRKRRH 197 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,463,167 Number of Sequences: 27780 Number of extensions: 348691 Number of successful extensions: 1343 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1343 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2072006206 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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