Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0083
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   6.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.9  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 212 LFHQIRFIWIVWLQIQ 165
           L HQ  +IW+VWL  Q
Sbjct: 213 LSHQHAWIWLVWLLSQ 228


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 212 LFHQIRFIWIVWLQIQ 165
           L HQ  +IW+VWL  Q
Sbjct: 446 LSHQHAWIWLVWLLSQ 461


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 212 LFHQIRFIWIVWLQIQ 165
           L HQ  +IW+VWL  Q
Sbjct: 446 LSHQHAWIWLVWLLSQ 461


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 520 RPASQFVPRLYGFKIHPLAYQIQQAAAN 603
           +  S++  R   FKIH L  + QQA AN
Sbjct: 73  KSGSRYGRRSNWFKIHCLLQEQQQAGAN 100


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 206 HQIRFIWIVWLQIQNHV 156
           HQ  +IW++WL  Q  +
Sbjct: 461 HQHAWIWLLWLLSQTWI 477


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 206 HQIRFIWIVWLQIQNHV 156
           HQ  +IW++WL  Q  +
Sbjct: 461 HQHAWIWLLWLLSQTWI 477


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 206 HQIRFIWIVWLQIQNHV 156
           HQ  +IW++WL  Q  +
Sbjct: 461 HQHAWIWLLWLLSQTWI 477


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 206 HQIRFIWIVWLQIQNHV 156
           HQ  +IW++WL  Q  +
Sbjct: 461 HQHAWIWLLWLLSQTWI 477


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 171 LEPDNPNESDLVEQASEILYGLIHARYI*PIG---ALVKCW 284
           L PDNPN  +++E+  + L  L     +  +G     ++CW
Sbjct: 369 LNPDNPNVYEILEKLYKDLLELSDETELFHLGGDEVNLECW 409


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 329 SIHVGNIQNPQTGTYP 282
           +I + N+QNP TG+ P
Sbjct: 675 NILLKNLQNPSTGSKP 690


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 75  EVDEDYINDKFNLTGLN 125
           ++  DY+NDK+   G++
Sbjct: 29  DIPNDYLNDKYKPLGVS 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,779
Number of Sequences: 336
Number of extensions: 4415
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)